Go Annotations as Summary Text (Tabular View) (GO Graph)

GO curators for mouse genes have assigned the following annotations to the gene product of Mmp16. (This text reflects annotations as of Wednesday, January 23, 2013.)

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Summary from NCBI RefSeq

[Summary is not available for the mouse gene. This summary is for the human ortholog.] Proteins of the matrix metalloproteinase (MMP) family are involved in the breakdown of extracellular matrix in normal physiological processes, such as embryonic development, reproduction, and tissue remodeling, as well as in disease processes, such as arthritis and metastasis. Most MMP's are secreted as inactive proproteins which are activated when cleaved by extracellular proteinases. The encoded protein activates MMP2 by cleavage. This gene was once referred to as MT-MMP2, but was renamed as MT-MMP3 or MMP16. [provided by RefSeq, Oct 2010]

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Summary text based on GO annotations supported by structural data

• Mmp16 encodes a protein or proteins that contain the following InterPro domains: Hemopexin/matrixin, Hemopexin/matrixin, conserved site, Hemopexin/matrixin, repeat, Metallopeptidase, catalytic domain, Peptidase M10, metallopeptidase, Peptidase M10A, cysteine switch, zinc binding site, Peptidase M10A, matrix metallopeptidase, Peptidase M10A, matrix metallopeptidase, C-terminal, Peptidase M10A, matrix metallopeptidase, stromelysin type, Peptidase, metallopeptidase, Peptidoglycan binding-like, indicating that the gene product:
  • participates in the following biological processes:
    • metabolic process
    • proteolysis
  • performs the following molecular functions:
    • calcium ion binding
    • metalloendopeptidase activity
    • metallopeptidase activity
    • zinc ion binding
  • is located in the following cellular components:
    • extracellular matrix

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Summary text for additional MGI annotations

• Automated translation to GO terms of SwissProt keywords that describe Mmp16 indicates that it:
  • participates in the following biological processes:
    • collagen catabolic process
    • proteolysis
  • performs the following molecular functions:
    • hydrolase activity
    • metal ion binding
    • metallopeptidase activity
    • peptidase activity
  • is located in the following cellular components:
    • integral to membrane
    • membrane
    • plasma membrane

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Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IC Inferred by curator

IDA Inferred from direct assay

IEA Inferred from electronic annotation

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

ISS Inferred from sequence or structural similarity

ISO Inferred from sequence orthology

ISA Inferred from sequence alignment

ISM Inferred from sequence model

NAS Non-traceable author statement

ND No biological data available

RCA Reviewed computational analysis

TAS Traceable author statement

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