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Symbol
Name
ID
Sox9
SRY (sex determining region Y)-box 9
MGI:98371
Phenotype annotations related to skeleton
*Aspects of the system are reported to show a normal phenotype.
Darker colors indicate more annotations
Human Phenotypes
Frontal bossing
Micrognathia
Macrocephaly
Relative macrocephaly
Wide anterior fontanel
Short neck
Bowing of the long bones
Femoral bowing
Tibial bowing
Anterior tibial bowing
Short 1st metacarpal
Short phalanx of finger
Shortening of all phalanges of fingers
Contracture of the distal interphalangeal joint of the fingers
Hallux valgus
Shortening of all phalanges of the toes
Fibular hypoplasia
Metatarsus adductus
Patellar hypoplasia
Dislocated radial head
Hip dislocation
Joint hypermobility
Recurrent fractures
Delayed epiphyseal ossification
Short long bone
Hypoplastic iliac wing
Narrow iliac wing
Hypoplastic inferior ilia
11 pairs of ribs
Thin ribs
Hypoplastic scapulae
Small abnormally formed scapulae
Absent sternal ossification
Pectus carinatum
Thoracic scoliosis
Thoracic hypoplasia
Narrow chest
Cervical kyphosis
Kyphosis
Kyphoscoliosis
Scoliosis
Hypoplastic cervical vertebrae
Poorly ossified cervical vertebrae
Cervical spine instability
Disease(s) Associated with SOX9
campomelic dysplasia

Mouse Phenotypes
skeleton phenotype
abnormal craniofacial bone morphology
abnormal cranium morphology
absent basisphenoid bone
absent styloid process
abnormal Meckel's cartilage morphology
absent Meckel's cartilage
decreased cranium length
absent presphenoid bone
abnormal hyoid bone morphology
absent hyoid bone body
absent hyoid bone lesser horns
small mandible
short mandible
short maxilla
micrognathia
domed cranium
absent incus
absent malleus
absent stapes
absent nasal capsule
abnormal humerus morphology
absent deltoid tuberosity
short humerus
bowed radius
short radius
bowed ulna
short ulna
bowed fibula
bowed tibia
abnormal laryngeal cartilage morphology
absent thyroid cartilage
abnormal tracheal cartilage morphology
abnormal long bone morphology
increased width of hypertrophic chondrocyte zone
abnormal scapula morphology
abnormal scapular spine morphology
small scapula
scapular bone hypoplasia
abnormal sternum morphology
abnormal sternebra morphology
abnormal xiphoid process morphology
absent sternum
short sternum
abnormal pelvic girdle bone morphology
abnormal ilium morphology
abnormal ischium morphology
abnormal pubis morphology
small pubis
small thoracic cage
kyphosis
abnormal vertebrae morphology
abnormal vertebrae development
abnormal vertebral body morphology
abnormal cartilage development
absent cartilage
abnormal skeleton development
abnormal epiphyseal plate morphology
chondrodystrophy
abnormal bone ossification
abnormal bone mineralization
abnormal endochondral bone ossification
delayed endochondral bone ossification
premature endochondral bone ossification
premature bone ossification
abnormal chondrocyte physiology
Availability Mouse Genotype
Tg(Prrx1-Sox9,-lacZ)1Haak/Tg(Prrx1-Sox9,-lacZ)1Haak
Sox9Bbfc/Sox9+
Sox9tm1.1Gsr/Sox9+
Sox9tm1.2Ksec/Sox9+
Sox9tm1Crm/Sox9+
Sox9tm1Gsr/Sox9tm1Gsr
Krt19tm1(cre)Mmt/Krt19+  (conditional)
Sox9tm1Gsr/Sox9tm1Gsr
Tg(Col2a1/Acan-rtTA,tetO-cre)#Vlf/0  (conditional)
Sox9tm2Crm/Sox9tm2Crm
Tg(Col2a1-cre)1Bhr/0  (conditional)
Sox9tm2Crm/Sox9tm2Crm
Tg(Prrx1-cre)1Cjt/0  (conditional)
Sox9tm2Crm/Sox9tm2Crm
H2az2Tg(Wnt1-cre)11Rth/H2az2+  (conditional)
Sox9tm3.1Tlu/Sox9tm3.1Tlu
Tg(Col2a1-cre)1Bhr/0  (conditional)
Sox9tm4.1Tlu/Sox9tm4.1Tlu
Tg(Col2a1-cre)1Bhr/0  (conditional)
Col10a1tm1(cre)Haak/Col10a1+
Tg(CAG-mRFP1,-SOX9,-EGFP)1Haak/0  (conditional)
Sox9tm2Crm/Sox9+
Tg(Col2a1-cre)1Bhr/0  (conditional)
Sox9tm2Crm/Sox9+
Tg(Prrx1-cre)1Cjt/0  (conditional)
Sox9tm4.1Tlu/Sox9+
Tg(Col2a1-cre)1Bhr/0  (conditional)
*
Tg(CAG-mRFP1,-SOX9,-EGFP)1Haak/0
Tg(Col2a1-cre)1Bhr/0  (conditional)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory