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Gene Expression Data
Assay Details
Assay
Reference: J:175568 Flores-Alcantar A, et al., Dynamics of expression of ARID1A and ARID1B subunits in mouse embryos and in cells during the cell cycle. Cell Tissue Res. 2011 Jul;345(1):137-48
Assay type: RNA in situ
MGI Accession ID: MGI:6515745
Gene symbol: Arid1b
Gene name: AT rich interactive domain 1B (SWI-like)
Probe: Arid1b probe1
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Results
Specimen 2a: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: embryo Weak Regionally restricted 2a Expression only detected after long exposure.
TS11: extraembryonic component Weak Regionally restricted 2a Expression only detected after long exposure.
TS11: chorion Present 2a
TS11: mesoderm Present 2a
TS11: neural fold Present 2a

Specimen 2b: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: mesoderm Strong 2b Maximal intensity of expression in mesoderm.
TS11: embryo ectoderm Present Regionally restricted 2b Expression in distal epiblast and visceral endoderm.
TS11: primitive endoderm Present Regionally restricted 2b Expression in distal epiblast and visceral endoderm.

Specimen 2c: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: embryo Weak Regionally restricted 2c Expression only detected after long exposure.
TS13: future spinal cord neural plate Present 2c Expression restricted to neural tissue, including neural crest and posterior neural plate.
TS13: neural crest Present 2c Expression restricted to neural tissue, including neural crest and posterior neural plate.
TS13: neural ectoderm Present 2c Expression restricted to neural tissue, including neural crest and posterior neural plate.

Specimen 2d: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future prosencephalon Present 2d Expression restricted to neural tissue, including forebrain.

Specimen 2e: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: embryo Present Regionally restricted 2e
TS15: future brain Absent 2e Expression absent in brain.

Specimen 2f: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: branchial arch Strong 2f Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
TS15: gut Strong 2f Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
TS15: head mesenchyme Strong 2f Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
TS15: optic vesicle Strong 2f Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.
TS15: trunk mesenchyme Strong 2f Highest levels of expression in branchial arches, optic vesicle, head mesenchyme, trunk ventral mesenchyme, and intestine.

Specimen 1g: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: embryo Weak Regionally restricted 2g Expression downregulated at 10.5 dpc.
TS17: eye Present Regionally restricted 2g Expression mainly in optic vesicle and otic vesicle.
TS17: otocyst Present Regionally restricted 2g Expression mainly in optic vesicle and otic vesicle.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/28/2022
MGI 6.20
The Jackson Laboratory