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Gene Expression Data
Assay Details
Assay
Reference: J:264256 Bernardo AS, et al., Mammalian embryo comparison identifies novel pluripotency genes associated with the naive or primed state. Biol Open. 2018 Aug 17;7(8):bio033282
Assay type: RT-PCR
MGI Accession ID: MGI:6202676
Gene symbol: Sema6a
Gene name: sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
Probe: Sema6a-pA, Sema6a-pB
Probe preparation: labelled with SYBR green
Assay notes: Quantitative RT-PCR. Expression was normalized against Gapdh.
Results
 Sample Information Bands Other Sample Information
Lane AgeStructure 137 bp (a) Amount Genetic BackgroundMutant Allele(s)Sex Note
ICM E3.5 TS4: inner cell mass Not Specified 0.3 µg; total RNA (C57BL/6J x DBA/2J)F1 Not Specified ICM - Inner cell mass
Blast E3.5 TS4: blastocyst-stage conceptus Not Specified 0.3 µg; total RNA (C57BL/6J x DBA/2J)F1 Not Specified Blast - Blastocyst
ERSE E6.25 TS8: epiblast Present 0.3 µg; total RNA Not Specified Not Specified Either 129S2 or (C57BL/6J x DBA/2J)F1 mice were used. ERSE - epithelial radially symmetric epiblast.
APE E7.25 TS10: embryo Present 0.3 µg; total RNA Not Specified Not Specified Either 129S2 or (C57BL/6J x DBA/2J)F1 mice were used. APE - asymmetrical elongated anterior to posterior epiblast.
Notes:
(a) Expression was higher in ERSE or APE stage embryos than in ICM stage embryos.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/19/2024
MGI 6.23
The Jackson Laboratory