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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541573
Gene symbol: Susd2
Gene name: sushi domain containing 2
Probe: RIKEN clone 9930105B06 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:9055: embryonic day 15.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:9055
TS23: metanephros Present Regionally restricted GUDMAP:9055
TS23: late tubule Present GUDMAP:9055
TS23: renal cortex Present GUDMAP:9055
TS23: renal capsule Absent GUDMAP:9055
TS23: cap mesenchyme Absent GUDMAP:9055
TS23: ureteric tip Absent GUDMAP:9055
TS23: early nephron Absent GUDMAP:9055
TS23: nephrogenic zone Absent GUDMAP:9055 signal seen in the nephrogenic zone is background staining
TS23: renal medulla Ambiguous GUDMAP:9055
TS23: renal pelvis Ambiguous GUDMAP:9055
Specimen GUDMAP:9056: embryonic day 15.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:9056
TS23: bladder Present GUDMAP:9056
Specimen GUDMAP:9170: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present Regionally restricted GUDMAP:9170
TS23: metanephros Present Regionally restricted GUDMAP:9170
TS23: renal cortex Present Regionally restricted GUDMAP:9170
TS23: capillary loop renal corpuscle Present Regionally restricted GUDMAP:9170 weak expression in visceral epithelium
TS23: visceral epithelium of capillary loop renal corpuscle Present GUDMAP:9170 weak expression
TS23: maturing renal corpuscle Present Regionally restricted GUDMAP:9170 weak expression in visceral epithelium
TS23: maturing glomerular tuft Present Regionally restricted GUDMAP:9170 weak expression in visceral epithelium
TS23: visceral epithelium of maturing renal corpuscle Present GUDMAP:9170 weak expression
TS23: cortical renal tubule Present Regionally restricted GUDMAP:9170 graded expression; strong expression in the majority of tubules of maturing nephrons. Expression absent from a small subset of tubules likely to be subset of early distal. Graded expression strength with weaker expression in early proximal tubules
TS23: cortical early proximal tubule Present GUDMAP:9170
TS23: cortical early distal tubule Present Regionally restricted GUDMAP:9170 strong expression in maturing nephrons. Expression absent from a subset of early distal tubules immediately adjacent to the renal corpuscle adjacent to the vascular pole
TS23: renal medulla Present Regionally restricted GUDMAP:9170
TS23: immature loop of Henle Present GUDMAP:9170 moderate expression
TS23: renal pelvis Present Regionally restricted GUDMAP:9170
TS23: pelvic smooth muscle Present GUDMAP:9170
TS23: nephrogenic zone Absent GUDMAP:9170
TS23: nephrogenic interstitium Absent GUDMAP:9170
TS23: cap mesenchyme Absent GUDMAP:9170
TS23: pretubular aggregate Absent GUDMAP:9170
TS23: ureteric tip Absent GUDMAP:9170
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:9170
TS23: renal vesicle Absent GUDMAP:9170
TS23: comma-shaped body Absent GUDMAP:9170
TS23: upper limb of comma-shaped body Absent GUDMAP:9170
TS23: lower limb of comma-shaped body Absent GUDMAP:9170
TS23: s-shaped body Absent GUDMAP:9170
TS23: renal connecting tubule of s-shaped body Absent GUDMAP:9170
TS23: distal segment of s-shaped body Absent GUDMAP:9170
TS23: medial segment of s-shaped body Absent GUDMAP:9170
TS23: proximal segment of s-shaped body Absent GUDMAP:9170
TS23: visceral epithelium of s-shaped body Absent GUDMAP:9170
TS23: parietal epithelium of s-shaped body Absent GUDMAP:9170
TS23: parietal epithelium of capillary loop renal corpuscle Absent GUDMAP:9170
TS23: presumptive mesangium of capillary loop renal corpuscle Absent GUDMAP:9170
TS23: presumptive endothelium of capillary loop renal corpuscle Absent GUDMAP:9170
TS23: associated interstitium of capillary loop renal corpuscle Absent GUDMAP:9170
TS23: glomerular capillary system of maturing glomerular tuft Absent GUDMAP:9170
TS23: glomerular basement membrane of maturing renal corpuscle Absent GUDMAP:9170
TS23: glomerular mesangium of maturing glomerular tuft Absent GUDMAP:9170
TS23: Bowman's capsule of maturing renal corpuscle Absent GUDMAP:9170
TS23: parietal epithelium of maturing renal corpuscle Absent GUDMAP:9170
TS23: glomerular mesangium of maturing renal corpuscle Absent GUDMAP:9170
TS23: juxtaglomerular arteriole Absent GUDMAP:9170
TS23: renal connecting tubule Absent GUDMAP:9170
TS23: renal medullary vasculature Absent GUDMAP:9170
TS23: renal medullary arterial system Absent GUDMAP:9170
TS23: renal medullary venous system Absent GUDMAP:9170
TS23: renal medullary capillary Absent GUDMAP:9170
TS23: medullary collecting duct Absent GUDMAP:9170
TS23: pelvic urothelial lining Absent GUDMAP:9170
TS23: cortical collecting duct Absent GUDMAP:9170
TS23: renal cortical vasculature Absent GUDMAP:9170
TS23: renal cortical arterial system Absent GUDMAP:9170
TS23: renal cortical venous system Absent GUDMAP:9170
TS23: renal cortical capillary Absent GUDMAP:9170
TS23: perihilar interstitium Ambiguous GUDMAP:9170
TS23: anlage of loop of Henle of cortical renal tubule Ambiguous GUDMAP:9170
TS23: cortical renal tubule of maturing nephron group Present Regionally restricted GUDMAP:9170 graded expression
TS23: early proximal tubule of maturing nephron Present GUDMAP:9170
TS23: early distal tubule of maturing nephron Present Regionally restricted GUDMAP:9170
TS23: cortical renal tubule of capillary loop nephron group Present GUDMAP:9170 moderate expression
TS23: renal connecting segment of comma-shaped body Absent GUDMAP:9170
TS23: renal connecting tubule of maturing nephron Absent GUDMAP:9170
TS23: early distal tubule of capillary loop nephron Ambiguous GUDMAP:9170
TS23: early proximal tubule of capillary loop nephron Ambiguous GUDMAP:9170
Specimen GUDMAP:9171: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureter Present Regionally restricted GUDMAP:9171
TS23: ureteral mesenchyme Present Regionally restricted GUDMAP:9171
TS23: ureteral smooth muscle layer Present GUDMAP:9171
TS23: urothelium of ureter Absent GUDMAP:9171
TS23: ureteral vasculature Absent GUDMAP:9171
TS23: ureteral smooth muscle layer interstitium Ambiguous GUDMAP:9171
TS23: ureteral mesenchyme outer layer Ambiguous GUDMAP:9171
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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04/16/2024
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