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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423616
Gene symbol: Ctnna2
Gene name: catenin (cadherin associated protein), alpha 2
Probe: EH3386 probe 3326
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EH3386; Specimen C3357: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C3357_4_3C
TS22: central nervous system Strong Regionally restricted Embryo_C3357_4_3C
TS22: telencephalon Strong Regionally restricted Embryo_C3357_4_3C
TS22: cerebral cortex Strong Regionally restricted Embryo_C3357_4_3C
TS22: neocortex Strong Regionally restricted Embryo_C3357_4_3C
TS22: olfactory cortex Strong Regionally restricted Embryo_C3357_4_3C
TS22: main olfactory bulb Strong Regionally restricted Embryo_C3357_4_3C
TS22: piriform cortex Strong Ubiquitous Embryo_C3357_4_1B
TS22: hippocampus Strong Regionally restricted Embryo_C3357_4_3C
TS22: basal ganglia Strong Ubiquitous Embryo_C3357_4_1B
TS22: corpus striatum Strong Ubiquitous Embryo_C3357_4_1B Expression was strong in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Moderate Ubiquitous Embryo_C3357_4_3C
TS22: amygdala Strong Ubiquitous Embryo_C3357_4_1B
TS22: telencephalon septum Moderate Ubiquitous Embryo_C3357_4_3C
TS22: pallidum Moderate Ubiquitous Embryo_C3357_4_3B Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Ubiquitous Embryo_C3357_4_3C
TS22: thalamus Moderate Ubiquitous Embryo_C3357_4_3C
TS22: hypothalamus Moderate Ubiquitous Embryo_C3357_4_3C
TS22: midbrain Strong Ubiquitous Embryo_C3357_4_4B
TS22: pretectum Moderate Ubiquitous Embryo_C3357_4_3C
TS22: superior colliculus Strong Ubiquitous Embryo_C3357_4_4B
TS22: inferior colliculus Strong Ubiquitous Embryo_C3357_4_4B
TS22: midbrain tegmentum Strong Ubiquitous Embryo_C3357_4_4B
TS22: hindbrain Strong Ubiquitous Embryo_C3357_4_4B
TS22: cerebellum Strong Ubiquitous Embryo_C3357_4_4B
TS22: pons Strong Ubiquitous Embryo_C3357_4_4B
TS22: medulla oblongata Strong Ubiquitous Embryo_C3357_4_4B
TS22: spinal cord Strong Ubiquitous Embryo_C3357_4_4B
TS22: choroid plexus Weak Regionally restricted Embryo_C3357_4_3C
TS22: meninges Absent
TS22: peripheral nervous system Strong Ubiquitous Embryo_C3357_4_5C
TS22: cranial ganglion Strong Ubiquitous Embryo_C3357_4_1B
TS22: dorsal root ganglion Strong Ubiquitous Embryo_C3357_4_5C
TS22: eye Strong Regionally restricted Embryo_C3357_4_1B
TS22: retina Strong Regionally restricted Embryo_C3357_4_1B
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Strong Regionally restricted Embryo_C3357_4_3C
TS22: olfactory epithelium Strong Regionally restricted Embryo_C3357_4_3C
TS22: ear Strong Regionally restricted Embryo_C3357_4_2C
TS22: inner ear Strong Regionally restricted Embryo_C3357_4_2C
TS22: cochlea Strong Regionally restricted Embryo_C3357_4_3A
TS22: inner ear labyrinth Strong Regionally restricted Embryo_C3357_4_2C
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_C3357_4_4A Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_C3357_4_3C
TS22: salivary gland Absent
TS22: tongue Strong Regionally restricted Embryo_C3357_4_4A
TS22: tooth Absent
TS22: palatal shelf Absent
TS22: esophagus Moderate Ubiquitous Embryo_C3357_4_4B
TS22: stomach Strong Regionally restricted Embryo_C3357_4_1D
TS22: liver Absent
TS22: respiratory system Moderate Regionally restricted Embryo_C3357_4_3A
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Moderate Regionally restricted Embryo_C3357_4_3A
TS22: urinary system Strong Regionally restricted Embryo_C3357_4_2C Expression was strong in the genito-urinary system.
TS22: metanephros Absent
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Strong Regionally restricted Embryo_C3357_4_2C
TS22: genital tubercle Moderate Regionally restricted Embryo_C3357_4_4C
TS22: gonad Strong Regionally restricted Embryo_C3357_4_2C
TS22: gland Moderate Regionally restricted Embryo_C3357_4_3B Expression was detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Absent
TS22: adrenal gland Moderate Regionally restricted Embryo_C3357_4_3B
TS22: cardiovascular system Strong Regionally restricted Embryo_C3357_4_4B
TS22: heart Strong Regionally restricted Embryo_C3357_4_4B
TS22: heart atrium Strong Regionally restricted Embryo_C3357_4_4B
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Weak Regionally restricted Embryo_C3357_4_4C Expression was weak in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Weak Ubiquitous Embryo_C3357_4_4C
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Strong Regionally restricted Embryo_C3357_4_1D Expression was strong in the face/soft tissues.
TS22: facial bone primordium Strong Regionally restricted Embryo_C3357_4_3A
TS22: cranium Strong Ubiquitous Embryo_C3357_4_1A Expression was strong in the skull (base and vault).
TS22: axial skeleton Strong Regionally restricted Embryo_C3357_4_6A
TS22: tail Absent
TS22: forelimb Strong Regionally restricted Embryo_C3357_4_1A
TS22: hindlimb Strong Regionally restricted Embryo_C3357_4_1A
TS22: integumental system Strong Regionally restricted Embryo_C3357_4_1C
TS22: skin Strong Regionally restricted Embryo_C3357_4_1C
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory