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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423492
Gene symbol: Pank1
Gene name: pantothenate kinase 1
Probe: EN539 probe 459
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EN539; Specimen N322: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_N322_3_2A
TS22: central nervous system Strong Regionally restricted Embryo_N322_3_2A
TS22: telencephalon Strong Regionally restricted Embryo_N322_3_2A
TS22: cerebral cortex Strong Regionally restricted Embryo_N322_3_2A
TS22: neocortex Moderate Regionally restricted Embryo_N322_3_3B
TS22: olfactory cortex Moderate Regionally restricted Embryo_N322_3_5A
TS22: main olfactory bulb Moderate Regionally restricted Embryo_N322_3_5A
TS22: piriform cortex Absent
TS22: hippocampus Strong Regionally restricted Embryo_N322_3_2A
TS22: basal ganglia Moderate Regionally restricted Embryo_N322_3_5A
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Moderate Regionally restricted Embryo_N322_3_5A
TS22: pallidum Moderate Regionally restricted Embryo_N322_3_5A Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Absent
TS22: thalamus Absent
TS22: hypothalamus Absent
TS22: midbrain Moderate Regionally restricted Embryo_N322_3_3C
TS22: pretectum Absent
TS22: superior colliculus Absent
TS22: inferior colliculus Moderate Regionally restricted Embryo_N322_3_3C
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_N322_3_3B
TS22: hindbrain Moderate Regionally restricted Embryo_N322_3_3A
TS22: cerebellum Absent
TS22: pons Moderate Regionally restricted Embryo_N322_3_3A
TS22: medulla oblongata Moderate Regionally restricted Embryo_N322_3_3A
TS22: spinal cord Moderate Regionally restricted Embryo_N322_3_3A
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Moderate Ubiquitous Embryo_N322_3_2A
TS22: cranial ganglion Moderate Ubiquitous Embryo_N322_3_2A
TS22: dorsal root ganglion Moderate Ubiquitous Embryo_N322_3_2A
TS22: eye Moderate Regionally restricted Embryo_N322_3_1A
TS22: retina Moderate Regionally restricted Embryo_N322_3_1A
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Moderate Ubiquitous Embryo_N322_3_3A
TS22: olfactory epithelium Moderate Ubiquitous Embryo_N322_3_3A
TS22: ear Moderate Regionally restricted Embryo_N322_3_2A
TS22: inner ear Moderate Regionally restricted Embryo_N322_3_2A
TS22: cochlea Absent
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_N322_3_2A
TS22: middle ear Weak Regionally restricted Embryo_N322_3_1A
TS22: alimentary system Strong Regionally restricted Embryo_N322_3_2A Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_N322_3_3C
TS22: salivary gland Strong Ubiquitous Embryo_N322_3_2A
TS22: tongue Moderate Regionally restricted Embryo_N322_3_4C
TS22: tooth Strong Regionally restricted Embryo_N322_3_4C
TS22: palatal shelf Moderate Regionally restricted Embryo_N322_3_4A
TS22: esophagus Moderate Regionally restricted Embryo_N322_3_3B
TS22: stomach Moderate Regionally restricted Embryo_N322_3_1B
TS22: liver Moderate Ubiquitous Embryo_N322_3_1B
TS22: respiratory system Strong Regionally restricted Embryo_N322_3_2A
TS22: pharynx Moderate Regionally restricted Embryo_N322_3_3C
TS22: larynx Moderate Regionally restricted Embryo_N322_3_3C
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Strong Regionally restricted Embryo_N322_3_2A
TS22: urinary system Strong Regionally restricted Embryo_N322_3_4A Expression was strong in the genito-urinary system.
TS22: metanephros Moderate Ubiquitous Embryo_N322_3_2C
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Strong Regionally restricted Embryo_N322_3_4A
TS22: reproductive system Moderate Regionally restricted Embryo_N322_3_4C
TS22: genital tubercle Moderate Regionally restricted Embryo_N322_3_4C
TS22: gonad Absent
TS22: gland Moderate Regionally restricted Embryo_N322_3_2C Expression was detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Weak Ubiquitous Embryo_N322_3_2D
TS22: adrenal gland Moderate Ubiquitous Embryo_N322_3_2C
TS22: cardiovascular system Moderate Regionally restricted Embryo_N322_3_3C
TS22: heart Moderate Regionally restricted Embryo_N322_3_3C
TS22: heart atrium Absent
TS22: heart ventricle Moderate Ubiquitous Embryo_N322_3_3C
TS22: blood vessel Absent
TS22: hemolymphoid system Strong Ubiquitous Embryo_N322_3_1D Expression was strong in the immune system.
TS22: spleen primordium Strong Ubiquitous Embryo_N322_3_1D
TS22: thymus primordium Weak Ubiquitous Embryo_N322_3_2D
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Weak Regionally restricted Embryo_N322_3_1A
TS22: tail Moderate Regionally restricted Embryo_N322_3_4C
TS22: forelimb Strong Regionally restricted Embryo_N322_3_1A
TS22: hindlimb Strong Regionally restricted Embryo_N322_3_1A
TS22: integumental system Strong Regionally restricted Embryo_N322_3_1A
TS22: skin Strong Regionally restricted Embryo_N322_3_1A
TS22: hair Moderate Regionally restricted Embryo_N322_3_2C
TS22: vibrissa follicle Moderate Regionally restricted Embryo_N322_3_2C Expression was detected in whisker follicle.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory