About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423492
Gene symbol: Pank1
Gene name: pantothenate kinase 1
Probe: EN539 probe 459
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EN539; Specimen N322: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_N322_3_2A
TS22: central nervous system Strong Regionally restricted Embryo_N322_3_2A
TS22: telencephalon Strong Regionally restricted Embryo_N322_3_2A
TS22: cerebral cortex Strong Regionally restricted Embryo_N322_3_2A
TS22: neocortex Moderate Regionally restricted Embryo_N322_3_3B
TS22: olfactory cortex Moderate Regionally restricted Embryo_N322_3_5A
TS22: main olfactory bulb Moderate Regionally restricted Embryo_N322_3_5A
TS22: piriform cortex Absent
TS22: hippocampus Strong Regionally restricted Embryo_N322_3_2A
TS22: basal ganglia Moderate Regionally restricted Embryo_N322_3_5A
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Moderate Regionally restricted Embryo_N322_3_5A
TS22: pallidum Moderate Regionally restricted Embryo_N322_3_5A Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Absent
TS22: thalamus Absent
TS22: hypothalamus Absent
TS22: midbrain Moderate Regionally restricted Embryo_N322_3_3C
TS22: pretectum Absent
TS22: superior colliculus Absent
TS22: inferior colliculus Moderate Regionally restricted Embryo_N322_3_3C
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_N322_3_3B
TS22: hindbrain Moderate Regionally restricted Embryo_N322_3_3A
TS22: cerebellum Absent
TS22: pons Moderate Regionally restricted Embryo_N322_3_3A
TS22: medulla oblongata Moderate Regionally restricted Embryo_N322_3_3A
TS22: spinal cord Moderate Regionally restricted Embryo_N322_3_3A
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Moderate Ubiquitous Embryo_N322_3_2A
TS22: cranial ganglion Moderate Ubiquitous Embryo_N322_3_2A
TS22: dorsal root ganglion Moderate Ubiquitous Embryo_N322_3_2A
TS22: eye Moderate Regionally restricted Embryo_N322_3_1A
TS22: retina Moderate Regionally restricted Embryo_N322_3_1A
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Moderate Ubiquitous Embryo_N322_3_3A
TS22: olfactory epithelium Moderate Ubiquitous Embryo_N322_3_3A
TS22: ear Moderate Regionally restricted Embryo_N322_3_2A
TS22: inner ear Moderate Regionally restricted Embryo_N322_3_2A
TS22: cochlea Absent
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_N322_3_2A
TS22: middle ear Weak Regionally restricted Embryo_N322_3_1A
TS22: alimentary system Strong Regionally restricted Embryo_N322_3_2A Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_N322_3_3C
TS22: salivary gland Strong Ubiquitous Embryo_N322_3_2A
TS22: tongue Moderate Regionally restricted Embryo_N322_3_4C
TS22: tooth Strong Regionally restricted Embryo_N322_3_4C
TS22: palatal shelf Moderate Regionally restricted Embryo_N322_3_4A
TS22: esophagus Moderate Regionally restricted Embryo_N322_3_3B
TS22: stomach Moderate Regionally restricted Embryo_N322_3_1B
TS22: liver Moderate Ubiquitous Embryo_N322_3_1B
TS22: respiratory system Strong Regionally restricted Embryo_N322_3_2A
TS22: pharynx Moderate Regionally restricted Embryo_N322_3_3C
TS22: larynx Moderate Regionally restricted Embryo_N322_3_3C
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Strong Regionally restricted Embryo_N322_3_2A
TS22: urinary system Strong Regionally restricted Embryo_N322_3_4A Expression was strong in the genito-urinary system.
TS22: metanephros Moderate Ubiquitous Embryo_N322_3_2C
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Strong Regionally restricted Embryo_N322_3_4A
TS22: reproductive system Moderate Regionally restricted Embryo_N322_3_4C
TS22: genital tubercle Moderate Regionally restricted Embryo_N322_3_4C
TS22: gonad Absent
TS22: gland Moderate Regionally restricted Embryo_N322_3_2C Expression was detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Weak Ubiquitous Embryo_N322_3_2D
TS22: adrenal gland Moderate Ubiquitous Embryo_N322_3_2C
TS22: cardiovascular system Moderate Regionally restricted Embryo_N322_3_3C
TS22: heart Moderate Regionally restricted Embryo_N322_3_3C
TS22: heart atrium Absent
TS22: heart ventricle Moderate Ubiquitous Embryo_N322_3_3C
TS22: blood vessel Absent
TS22: hemolymphoid system Strong Ubiquitous Embryo_N322_3_1D Expression was strong in the immune system.
TS22: spleen primordium Strong Ubiquitous Embryo_N322_3_1D
TS22: thymus primordium Weak Ubiquitous Embryo_N322_3_2D
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Weak Regionally restricted Embryo_N322_3_1A
TS22: tail Moderate Regionally restricted Embryo_N322_3_4C
TS22: forelimb Strong Regionally restricted Embryo_N322_3_1A
TS22: hindlimb Strong Regionally restricted Embryo_N322_3_1A
TS22: integumental system Strong Regionally restricted Embryo_N322_3_1A
TS22: skin Strong Regionally restricted Embryo_N322_3_1A
TS22: hair Moderate Regionally restricted Embryo_N322_3_2C
TS22: vibrissa follicle Moderate Regionally restricted Embryo_N322_3_2C Expression was detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory