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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423008
Gene symbol: Acot1
Gene name: acyl-CoA thioesterase 1
Probe: EH1662 probe 1621
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EH1662; Specimen C2823: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C2823_5_3D
TS22: central nervous system Strong Regionally restricted Embryo_C2823_5_3D
TS22: telencephalon Strong Regionally restricted Embryo_C2823_5_4D
TS22: cerebral cortex Moderate Regionally restricted Embryo_C2823_5_3B
TS22: neocortex Moderate Regionally restricted Embryo_C2823_5_3B
TS22: olfactory cortex Weak Regionally restricted Embryo_C2823_5_3D
TS22: main olfactory bulb Weak Regionally restricted Embryo_C2823_5_3D
TS22: piriform cortex Absent
TS22: hippocampus Weak Regionally restricted Embryo_C2823_5_2D
TS22: basal ganglia Strong Regionally restricted Embryo_C2823_5_1D
TS22: corpus striatum Strong Regionally restricted Embryo_C2823_5_1D Expression was strong in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Moderate Regionally restricted Embryo_C2823_5_3C
TS22: pallidum Weak Regionally restricted Embryo_C2823_5_4D Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Regionally restricted Embryo_C2823_5_4C
TS22: thalamus Moderate Regionally restricted Embryo_C2823_5_4C
TS22: hypothalamus Moderate Regionally restricted Embryo_C2823_5_4C
TS22: midbrain Strong Regionally restricted Embryo_C2823_5_3D
TS22: pretectum Strong Regionally restricted Embryo_C2823_5_4B
TS22: superior colliculus Strong Regionally restricted Embryo_C2823_5_3D
TS22: inferior colliculus Moderate Regionally restricted Embryo_C2823_5_3D
TS22: midbrain tegmentum Strong Regionally restricted Embryo_C2823_5_3D
TS22: hindbrain Strong Regionally restricted Embryo_C2823_5_3D
TS22: cerebellum Moderate Regionally restricted Embryo_C2823_5_3D
TS22: pons Strong Regionally restricted Embryo_C2823_5_3D
TS22: medulla oblongata Strong Regionally restricted Embryo_C2823_5_3D
TS22: spinal cord Strong Regionally restricted Embryo_C2823_5_4C
TS22: choroid plexus Weak Regionally restricted Embryo_C2823_5_3D
TS22: meninges Absent
TS22: peripheral nervous system Absent
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Weak Regionally restricted Embryo_C2823_5_5B
TS22: eye Weak Regionally restricted Embryo_C2823_5_6B
TS22: retina Absent
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Weak Regionally restricted Embryo_C2823_5_6B
TS22: nose Weak Regionally restricted Embryo_C2823_5_5B
TS22: olfactory epithelium Weak Regionally restricted Embryo_C2823_5_5B
TS22: ear Weak Regionally restricted Embryo_C2823_5_2D
TS22: inner ear Weak Regionally restricted Embryo_C2823_5_2D
TS22: cochlea Weak Regionally restricted Embryo_C2823_5_2D
TS22: inner ear labyrinth Weak Regionally restricted Embryo_C2823_5_3B
TS22: middle ear Weak Regionally restricted Embryo_C2823_5_1C
TS22: alimentary system Moderate Regionally restricted Embryo_C2823_5_2D Expression was detected in the digestive system.
TS22: intestine Weak Regionally restricted Embryo_C2823_5_4D
TS22: salivary gland Moderate Regionally restricted Embryo_C2823_5_2D
TS22: tongue Weak Regionally restricted Embryo_C2823_5_4D
TS22: tooth Weak Regionally restricted Embryo_C2823_5_4C
TS22: palatal shelf Weak Regionally restricted Embryo_C2823_5_4D
TS22: esophagus Weak Regionally restricted Embryo_C2823_5_4C
TS22: stomach Weak Regionally restricted Embryo_C2823_5_1D
TS22: liver Weak Regionally restricted Embryo_C2823_5_3D
TS22: respiratory system Moderate Regionally restricted Embryo_C2823_5_2D
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Moderate Regionally restricted Embryo_C2823_5_2D
TS22: urinary system Weak Regionally restricted Embryo_C2823_5_3D Expression was weak in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_C2823_5_3D
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Weak Regionally restricted Embryo_C2823_5_4C
TS22: reproductive system Weak Regionally restricted Embryo_C2823_5_5B
TS22: genital tubercle Weak Regionally restricted Embryo_C2823_5_5B
TS22: gonad Absent
TS22: gland Weak Regionally restricted Embryo_C2823_5_4B Expression was weak in the endocrine system.
TS22: thyroid gland Weak Regionally restricted Embryo_C2823_5_4B
TS22: pituitary gland Absent
TS22: pancreas Weak Regionally restricted Embryo_C2823_5_4B
TS22: adrenal gland Absent
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Weak Regionally restricted Embryo_C2823_5_4C Expression was weak in the immune system.
TS22: spleen primordium Weak Regionally restricted Embryo_C2823_5_1D
TS22: thymus primordium Weak Regionally restricted Embryo_C2823_5_4C
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Regionally restricted Embryo_C2823_5_1D
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Weak Regionally restricted Embryo_C2823_5_5B
TS22: forelimb Weak Regionally restricted Embryo_C2823_5_2A
TS22: hindlimb Weak Regionally restricted Embryo_C2823_5_2A
TS22: integumental system Weak Regionally restricted Embryo_C2823_5_2A
TS22: skin Absent
TS22: hair Weak Regionally restricted Embryo_C2823_5_2A
TS22: vibrissa follicle Weak Regionally restricted Embryo_C2823_5_2A Expression was weak in whisker follicle.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory