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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5422741
Gene symbol: Chst2
Gene name: carbohydrate sulfotransferase 2
Probe: GP56
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH119; Specimen MH171: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_MH171_4_6D
TS22: central nervous system Strong Regionally restricted Embryo_MH171_4_6D
TS22: telencephalon Strong Regionally restricted Embryo_MH171_4_6D
TS22: cerebral cortex Strong Regionally restricted Embryo_MH171_4_6D
TS22: neocortex Strong Regionally restricted Embryo_MH171_4_1B
TS22: olfactory cortex Strong Regionally restricted Embryo_MH171_4_3C
TS22: main olfactory bulb Strong Regionally restricted Embryo_MH171_4_3C
TS22: piriform cortex Moderate Regionally restricted Embryo_MH171_4_1C
TS22: hippocampus Weak Ubiquitous Embryo_MH171_4_4B
TS22: basal ganglia Strong Regionally restricted Embryo_MH171_4_2A
TS22: corpus striatum Moderate Ubiquitous Embryo_MH171_4_2A Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Weak Ubiquitous Embryo_MH171_4_3A
TS22: amygdala Moderate Regionally restricted Embryo_MH171_4_1B
TS22: telencephalon septum Moderate Regionally restricted Embryo_MH171_4_4C
TS22: pallidum Strong Regionally restricted Embryo_MH171_4_2A Expression was strong in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_MH171_4_6D
TS22: thalamus Strong Regionally restricted Embryo_MH171_4_6D
TS22: hypothalamus Moderate Regionally restricted Embryo_MH171_4_4C
TS22: midbrain Strong Regionally restricted Embryo_MH171_4_5B
TS22: pretectum Strong Regionally restricted Embryo_MH171_4_4D
TS22: superior colliculus Strong Regionally restricted Embryo_MH171_4_5B
TS22: inferior colliculus Strong Regionally restricted Embryo_MH171_4_5B
TS22: midbrain tegmentum Strong Regionally restricted Embryo_MH171_4_5B
TS22: hindbrain Strong Regionally restricted Embryo_MH171_4_4A
TS22: cerebellum Strong Regionally restricted Embryo_MH171_4_4C
TS22: pons Strong Regionally restricted Embryo_MH171_4_4A
TS22: medulla oblongata Strong Regionally restricted Embryo_MH171_4_4A
TS22: spinal cord Strong Regionally restricted Embryo_MH171_4_4D
TS22: choroid plexus Weak Ubiquitous Embryo_MH171_4_3D
TS22: meninges Absent
TS22: peripheral nervous system Moderate Regionally restricted Embryo_MH171_4_3A
TS22: cranial ganglion Moderate Regionally restricted Embryo_MH171_4_3A
TS22: dorsal root ganglion Weak Scattered Embryo_MH171_4_4A
TS22: eye Moderate Regionally restricted Embryo_MH171_4_1C
TS22: retina Moderate Regionally restricted Embryo_MH171_4_1C
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Strong Regionally restricted Embryo_MH171_4_3A
TS22: inner ear Strong Regionally restricted Embryo_MH171_4_3A
TS22: cochlea Strong Regionally restricted Embryo_MH171_4_3A
TS22: inner ear labyrinth Strong Regionally restricted Embryo_MH171_4_2B
TS22: middle ear Absent
TS22: alimentary system Strong Regionally restricted Embryo_MH171_4_5C Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_MH171_4_5C
TS22: salivary gland Strong Regionally restricted Embryo_MH171_4_6D
TS22: tongue Moderate Regionally restricted Embryo_MH171_4_5C
TS22: tooth Strong Regionally restricted Embryo_MH171_4_5C
TS22: palatal shelf Moderate Ubiquitous Embryo_MH171_4_5C
TS22: esophagus Weak Regionally restricted Embryo_MH171_4_5C
TS22: stomach Weak Regionally restricted Embryo_MH171_4_8D
TS22: liver Absent
TS22: respiratory system Strong Regionally restricted Embryo_MH171_4_2A
TS22: pharynx Moderate Regionally restricted Embryo_MH171_4_5C
TS22: larynx Moderate Regionally restricted Embryo_MH171_4_5B
TS22: trachea Moderate Regionally restricted Embryo_MH171_4_5B
TS22: main bronchus Moderate Regionally restricted Embryo_MH171_4_4C
TS22: lung Strong Regionally restricted Embryo_MH171_4_2A
TS22: urinary system Strong Regionally restricted Embryo_MH171_4_7C Expression was strong in the genito-urinary system.
TS22: metanephros Strong Regionally restricted Embryo_MH171_4_7C
TS22: ureter Absent
TS22: bladder Strong Regionally restricted Embryo_MH171_4_5A
TS22: urethra Strong Regionally restricted Embryo_MH171_4_5A
TS22: reproductive system Moderate Regionally restricted Embryo_MH171_4_5A
TS22: genital tubercle Moderate Regionally restricted Embryo_MH171_4_5A
TS22: gonad Absent
TS22: gland Strong Regionally restricted Embryo_MH171_4_6D Expression was strong in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Strong Regionally restricted Embryo_MH171_4_6D
TS22: adrenal gland Moderate Regionally restricted Embryo_MH171_4_6D
TS22: cardiovascular system Moderate Regionally restricted Embryo_MH171_4_4C
TS22: heart Moderate Scattered Embryo_MH171_4_5C
TS22: heart atrium Absent
TS22: heart ventricle Moderate Scattered Embryo_MH171_4_5C
TS22: blood vessel Moderate Regionally restricted Embryo_MH171_4_4C
TS22: hemolymphoid system Weak Regionally restricted Embryo_MH171_4_4D Expression was weak in the immune system.
TS22: spleen primordium Weak Scattered Embryo_MH171_4_8D
TS22: thymus primordium Weak Regionally restricted Embryo_MH171_4_4D
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Ubiquitous Embryo_MH171_4_8A
TS22: face Moderate Ubiquitous Embryo_MH171_4_2B Expression was detected in the face/soft tissues.
TS22: facial bone primordium Moderate Ubiquitous Embryo_MH171_4_3D
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Strong Regionally restricted Embryo_MH171_4_5A
TS22: forelimb Strong Regionally restricted Embryo_MH171_4_1A
TS22: hindlimb Strong Regionally restricted Embryo_MH171_4_8D
TS22: integumental system Moderate Regionally restricted Embryo_MH171_4_1A
TS22: skin Moderate Regionally restricted Embryo_MH171_4_1A
TS22: hair Weak Regionally restricted Embryo_MH171_4_1A
TS22: vibrissa follicle Weak Regionally restricted Embryo_MH171_4_1A Expression was weak in whisker follicle.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/05/2021
MGI 6.17
The Jackson Laboratory