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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5422408
Gene symbol: Acaca
Gene name: acetyl-Coenzyme A carboxylase alpha
Probe: T50048
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH2171; Specimen C2325: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C2325_2_3B
TS22: central nervous system Strong Regionally restricted Embryo_C2325_2_3B
TS22: telencephalon Strong Regionally restricted Embryo_C2325_2_3B
TS22: cerebral cortex Strong Regionally restricted Embryo_C2325_2_3B
TS22: neocortex Strong Regionally restricted Embryo_C2325_2_3B
TS22: olfactory cortex Strong Regionally restricted Embryo_C2325_2_3D
TS22: main olfactory bulb Strong Regionally restricted Embryo_C2325_2_3D
TS22: piriform cortex Absent
TS22: hippocampus Strong Regionally restricted Embryo_C2325_2_3A
TS22: basal ganglia Weak Regionally restricted Embryo_C2325_2_3C
TS22: corpus striatum Strong Regionally restricted Embryo_C2325_2_6A Expression was strong in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Weak Regionally restricted Embryo_C2325_2_3A
TS22: amygdala Weak Regionally restricted Embryo_C2325_2_3C
TS22: telencephalon septum Strong Regionally restricted Embryo_C2325_2_3B
TS22: pallidum Strong Regionally restricted Embryo_C2325_2_3A Expression was strong in the pallidum (medial ganglionic eminence).
TS22: diencephalon Strong Regionally restricted Embryo_C2325_2_4B
TS22: thalamus Strong Ubiquitous Embryo_C2325_2_4B
TS22: hypothalamus Weak Ubiquitous Embryo_C2325_2_3A
TS22: midbrain Strong Regionally restricted Embryo_C2325_2_4B
TS22: pretectum Moderate Regionally restricted Embryo_C2325_2_4A
TS22: superior colliculus Moderate Regionally restricted Embryo_C2325_2_3C
TS22: inferior colliculus Strong Regionally restricted Embryo_C2325_2_3C
TS22: midbrain tegmentum Strong Regionally restricted Embryo_C2325_2_4B
TS22: hindbrain Strong Regionally restricted Embryo_C2325_2_4B
TS22: cerebellum Weak Regionally restricted Embryo_C2325_2_5C
TS22: pons Strong Regionally restricted Embryo_C2325_2_4B
TS22: medulla oblongata Strong Regionally restricted Embryo_C2325_2_4B
TS22: spinal cord Moderate Regionally restricted Embryo_C2325_2_4D
TS22: choroid plexus Weak Regionally restricted Embryo_C2325_2_1A
TS22: meninges Absent
TS22: peripheral nervous system Strong Ubiquitous Embryo_C2325_2_5C
TS22: cranial ganglion Strong Ubiquitous Embryo_C2325_2_3A
TS22: dorsal root ganglion Strong Ubiquitous Embryo_C2325_2_5C
TS22: eye Strong Regionally restricted Embryo_C2325_2_1A
TS22: retina Strong Regionally restricted Embryo_C2325_2_1C
TS22: lens Strong Regionally restricted Embryo_C2325_2_1A
TS22: cornea Weak Ubiquitous Embryo_C2325_2_1B
TS22: optic nerve Weak Regionally restricted Embryo_C2325_2_2A
TS22: nose Moderate Regionally restricted Embryo_C2325_2_3C
TS22: olfactory epithelium Moderate Regionally restricted Embryo_C2325_2_3C
TS22: ear Weak Regionally restricted Embryo_C2325_2_1A
TS22: inner ear Weak Regionally restricted Embryo_C2325_2_1A
TS22: cochlea Weak Regionally restricted Embryo_C2325_2_3B
TS22: inner ear labyrinth Weak Regionally restricted Embryo_C2325_2_1D
TS22: middle ear Weak Regionally restricted Embryo_C2325_2_1A
TS22: alimentary system Strong Regionally restricted Embryo_C2325_2_4B Expression was strong in the digestive system.
TS22: intestine Strong Ubiquitous Embryo_C2325_2_4B
TS22: salivary gland Strong Ubiquitous Embryo_C2325_2_3A
TS22: tongue Weak Regionally restricted Embryo_C2325_2_4A
TS22: tooth Strong Regionally restricted Embryo_C2325_2_4D
TS22: palatal shelf Moderate Regionally restricted Embryo_C2325_2_5A
TS22: esophagus Strong Regionally restricted Embryo_C2325_2_4C
TS22: stomach Weak Regionally restricted Embryo_C2325_2_3B
TS22: liver Strong Ubiquitous Embryo_C2325_2_3B
TS22: respiratory system Moderate Regionally restricted Embryo_C2325_2_4C
TS22: pharynx Weak Regionally restricted Embryo_C2325_2_3D
TS22: larynx Weak Regionally restricted Embryo_C2325_2_3D
TS22: trachea Moderate Regionally restricted Embryo_C2325_2_4C
TS22: main bronchus Absent
TS22: lung Moderate Regionally restricted Embryo_C2325_2_3B
TS22: urinary system Weak Regionally restricted Embryo_C2325_2_3C Expression was weak in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_C2325_2_3C
TS22: ureter Absent
TS22: bladder Weak Regionally restricted Embryo_C2325_2_4C
TS22: urethra Weak Regionally restricted Embryo_C2325_2_4C
TS22: reproductive system Absent
TS22: genital tubercle Absent
TS22: gonad Absent
TS22: gland Strong Ubiquitous Embryo_C2325_2_5A Expression was strong in the endocrine system.
TS22: thyroid gland Strong Ubiquitous Embryo_C2325_2_5A
TS22: pituitary gland Weak Regionally restricted Embryo_C2325_2_4B
TS22: pancreas Weak Regionally restricted Embryo_C2325_2_3C
TS22: adrenal gland Absent
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Moderate Regionally restricted Embryo_C2325_2_4C Expression was detected in the immune system.
TS22: spleen primordium Moderate Scattered Embryo_C2325_2_2C
TS22: thymus primordium Moderate Regionally restricted Embryo_C2325_2_4C
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Regionally restricted Embryo_C2325_2_1A
TS22: face Absent Expression was not detected in the face/soft tissues.
TS22: facial bone primordium Strong Regionally restricted Embryo_C2325_2_5A
TS22: cranium Strong Regionally restricted Embryo_C2325_2_2B Expression was strong in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Strong Regionally restricted Embryo_C2325_2_4B
TS22: forelimb Strong Ubiquitous Embryo_C2325_2_2A
TS22: hindlimb Strong Regionally restricted Embryo_C2325_2_2A
TS22: integumental system Strong Regionally restricted Embryo_C2325_2_2A
TS22: skin Moderate Regionally restricted Embryo_C2325_2_1A
TS22: hair Strong Regionally restricted Embryo_C2325_2_2A
TS22: vibrissa follicle Strong Regionally restricted Embryo_C2325_2_2A Expression was strong in whisker follicle.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory