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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421865
Gene symbol: Aldh7a1
Gene name: aldehyde dehydrogenase family 7, member A1
Probe: T30880
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EB2198; Specimen B878: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Moderate Regionally restricted Embryo_B878_6_3A
TS22: central nervous system Weak Regionally restricted Embryo_B878_6_3C
TS22: telencephalon Weak Regionally restricted Embryo_B878_6_3A
TS22: cerebral cortex Weak Regionally restricted Embryo_B878_6_3A
TS22: neocortex Weak Regionally restricted Embryo_B878_6_2B
TS22: olfactory cortex Weak Regionally restricted Embryo_B878_6_3A
TS22: main olfactory bulb Weak Regionally restricted Embryo_B878_6_3A
TS22: piriform cortex Absent
TS22: hippocampus Weak Regionally restricted Embryo_B878_6_2B
TS22: basal ganglia Weak Regionally restricted Embryo_B878_6_3A
TS22: corpus striatum Weak Regionally restricted Embryo_B878_6_2B Expression was weak in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Weak Regionally restricted Embryo_B878_6_3A
TS22: pallidum Weak Regionally restricted Embryo_B878_6_3A Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Weak Regionally restricted Embryo_B878_6_3B
TS22: thalamus Weak Regionally restricted Embryo_B878_6_3B
TS22: hypothalamus Weak Regionally restricted Embryo_B878_6_3B
TS22: midbrain Weak Regionally restricted Embryo_B878_6_3B
TS22: pretectum Absent
TS22: superior colliculus Weak Regionally restricted Embryo_B878_6_3B
TS22: inferior colliculus Absent
TS22: midbrain tegmentum Weak Regionally restricted Embryo_B878_6_3B
TS22: hindbrain Weak Regionally restricted Embryo_B878_6_2C
TS22: cerebellum Absent
TS22: pons Weak Regionally restricted Embryo_B878_6_3C
TS22: medulla oblongata Absent
TS22: spinal cord Weak Regionally restricted Embryo_B878_6_3C
TS22: choroid plexus Absent
TS22: meninges Absent
TS22: peripheral nervous system Moderate Regionally restricted Embryo_B878_6_5A
TS22: cranial ganglion Absent
TS22: dorsal root ganglion Moderate Regionally restricted Embryo_B878_6_5A
TS22: eye Weak Regionally restricted Embryo_B878_6_1A
TS22: retina Absent
TS22: lens Absent
TS22: cornea Weak Regionally restricted Embryo_B878_6_1A
TS22: optic nerve Absent
TS22: nose Moderate Regionally restricted Embryo_B878_6_3A
TS22: olfactory epithelium Moderate Regionally restricted Embryo_B878_6_3A
TS22: ear Absent
TS22: inner ear Absent
TS22: cochlea Absent
TS22: inner ear labyrinth Absent
TS22: middle ear Absent
TS22: alimentary system Weak Regionally restricted Embryo_B878_6_2C Expression was weak in the digestive system.
TS22: intestine Absent
TS22: salivary gland Weak Regionally restricted Embryo_B878_6_2C
TS22: tongue Absent
TS22: tooth Absent
TS22: palatal shelf Absent
TS22: esophagus Absent
TS22: stomach Absent
TS22: liver Weak Regionally restricted Embryo_B878_6_3C
TS22: respiratory system Weak Regionally restricted Embryo_B878_6_1D
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Weak Regionally restricted Embryo_B878_6_1D
TS22: urinary system Weak Regionally restricted Embryo_B878_6_3C Expression was weak in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_B878_6_1D
TS22: ureter Absent
TS22: bladder Weak Regionally restricted Embryo_B878_6_3C
TS22: urethra Absent
TS22: reproductive system Absent
TS22: genital tubercle Absent
TS22: gonad Absent
TS22: gland Moderate Regionally restricted Embryo_B878_6_2B Expression was detected in the endocrine system.
TS22: thyroid gland Weak Regionally restricted Embryo_B878_6_3B
TS22: pituitary gland Absent
TS22: pancreas Moderate Regionally restricted Embryo_B878_6_2B
TS22: adrenal gland Absent
TS22: cardiovascular system Absent
TS22: heart Absent
TS22: heart atrium Absent
TS22: heart ventricle Absent
TS22: blood vessel Absent
TS22: hemolymphoid system Weak Regionally restricted Embryo_B878_6_3C Expression was weak in the immune system.
TS22: spleen primordium Weak Regionally restricted Embryo_B878_6_1A
TS22: thymus primordium Weak Regionally restricted Embryo_B878_6_3C
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Weak Regionally restricted Embryo_B878_6_1C Expression was weak in the face/soft tissues.
TS22: facial bone primordium Weak Regionally restricted Embryo_B878_6_2D
TS22: cranium Weak Regionally restricted Embryo_B878_6_1B Expression was weak in the skull (base and vault).
TS22: axial skeleton Weak Regionally restricted Embryo_B878_6_1A
TS22: tail Absent
TS22: forelimb Absent
TS22: hindlimb Absent
TS22: integumental system Absent
TS22: skin Absent
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory