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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4829092
Gene symbol: Uhrf1
Gene name: ubiquitin-like, containing PHD and RING finger domains, 1
Probe: T39643
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. The probe used in this assay may also recognize another gene (see Assay MGI:4829093).
Results
Specimen euxassay_016008_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_016008_01
TS23: liver lobe Weak Regionally restricted euxassay_016008_01
TS23: neural retina Moderate Regionally restricted euxassay_016008_01

Specimen euxassay_016008_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_016008_02
TS23: liver lobe Weak Regionally restricted euxassay_016008_02
TS23: neural retina Weak Regionally restricted euxassay_016008_02

Specimen euxassay_016008_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_016008_03
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_03
TS23: liver lobe Moderate Regionally restricted euxassay_016008_03
TS23: neural retina Weak Regionally restricted euxassay_016008_03

Specimen euxassay_016008_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_04
TS23: liver lobe Weak Regionally restricted euxassay_016008_04
TS23: neural retina Weak Regionally restricted euxassay_016008_04
TS23: lung Moderate Regionally restricted euxassay_016008_04

Specimen euxassay_016008_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_05
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_016008_05
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_016008_05
TS23: liver lobe Moderate Regionally restricted euxassay_016008_05
TS23: vibrissa Moderate Regionally restricted euxassay_016008_05
TS23: lung Moderate Regionally restricted euxassay_016008_05

Specimen euxassay_016008_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_06
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_016008_06
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_016008_06
TS23: liver lobe Moderate Regionally restricted euxassay_016008_06
TS23: vibrissa Moderate Regionally restricted euxassay_016008_06
TS23: lung Moderate Regionally restricted euxassay_016008_06

Specimen euxassay_016008_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_07
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_016008_07
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_016008_07
TS23: liver lobe Moderate Regionally restricted euxassay_016008_07
TS23: metanephros Moderate Regionally restricted euxassay_016008_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_016008_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_016008_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_016008_07
TS23: midgut Moderate Regionally restricted euxassay_016008_07
TS23: lung Moderate Regionally restricted euxassay_016008_07
TS23: olfactory epithelium Weak Regionally restricted euxassay_016008_07

Specimen euxassay_016008_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_08
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_016008_08
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_016008_08
TS23: liver lobe Weak Regionally restricted euxassay_016008_08
TS23: metanephros Moderate Regionally restricted euxassay_016008_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_016008_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_016008_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_016008_08
TS23: midgut Moderate Regionally restricted euxassay_016008_08
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_016008_08
TS23: lung Moderate Regionally restricted euxassay_016008_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_016008_08

Specimen euxassay_016008_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_09
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_016008_09
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_016008_09
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_016008_09
TS23: liver lobe Moderate Regionally restricted euxassay_016008_09
TS23: metanephros Moderate Regionally restricted euxassay_016008_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_016008_09
TS23: midgut Moderate Regionally restricted euxassay_016008_09
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_016008_09
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_016008_09
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_016008_09
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_016008_09
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_016008_09
TS23: lung Moderate Regionally restricted euxassay_016008_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_016008_09

Specimen euxassay_016008_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_016008_10
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016008_10
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_016008_10
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_016008_10
TS23: liver lobe Moderate Regionally restricted euxassay_016008_10
TS23: metanephros Moderate Regionally restricted euxassay_016008_10
TS23: upper jaw incisor Moderate Regionally restricted euxassay_016008_10
TS23: lower jaw incisor Moderate Regionally restricted euxassay_016008_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_016008_10
TS23: midgut Moderate Regionally restricted euxassay_016008_10
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_016008_10
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_016008_10
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_016008_10
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_016008_10
TS23: lung Moderate Regionally restricted euxassay_016008_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_016008_10

Specimen euxassay_016008_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_016008_11
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016008_11
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_016008_11
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_016008_11
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_016008_11
TS23: liver lobe Moderate Regionally restricted euxassay_016008_11
TS23: metanephros Moderate Regionally restricted euxassay_016008_11
TS23: upper jaw incisor Moderate Regionally restricted euxassay_016008_11
TS23: lower jaw incisor Moderate Regionally restricted euxassay_016008_11
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_016008_11
TS23: midgut Moderate Regionally restricted euxassay_016008_11
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_016008_11
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_016008_11
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_016008_11
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_016008_11
TS23: lung Moderate Regionally restricted euxassay_016008_11

Specimen euxassay_016008_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_016008_12
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_016008_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016008_12
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_016008_12
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_016008_12
TS23: thyroid gland Weak Regionally restricted euxassay_016008_12
TS23: liver lobe Moderate Regionally restricted euxassay_016008_12
TS23: lower jaw incisor Moderate Regionally restricted euxassay_016008_12
TS23: upper jaw incisor Weak Regionally restricted euxassay_016008_12
TS23: midgut Moderate Regionally restricted euxassay_016008_12
TS23: lung Moderate Regionally restricted euxassay_016008_12
TS23: olfactory epithelium Weak Regionally restricted euxassay_016008_12
TS23: vomeronasal organ Weak Regionally restricted euxassay_016008_12

Specimen euxassay_016008_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016008_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_016008_13
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_016008_13
TS23: thymus primordium Strong Regionally restricted euxassay_016008_13
TS23: thyroid gland Weak Regionally restricted euxassay_016008_13
TS23: liver lobe Moderate Regionally restricted euxassay_016008_13
TS23: midgut Moderate Regionally restricted euxassay_016008_13
TS23: lung Moderate Regionally restricted euxassay_016008_13
TS23: olfactory epithelium Moderate Regionally restricted euxassay_016008_13
TS23: bladder Weak Regionally restricted euxassay_016008_13

Specimen euxassay_016008_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_14
TS23: olfactory cortex ventricular layer Weak Uniform euxassay_016008_14
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_016008_14
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_016008_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016008_14
TS23: thymus primordium Strong Regionally restricted euxassay_016008_14
TS23: liver lobe Moderate Regionally restricted euxassay_016008_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_016008_14
TS23: upper jaw incisor Moderate Regionally restricted euxassay_016008_14
TS23: hindgut Moderate Regionally restricted euxassay_016008_14
TS23: midgut Moderate Regionally restricted euxassay_016008_14
TS23: lung Moderate Regionally restricted euxassay_016008_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_016008_14
TS23: vomeronasal organ Weak Regionally restricted euxassay_016008_14
TS23: bladder Weak Regionally restricted euxassay_016008_14

Specimen euxassay_016008_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_016008_15
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_15
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_016008_15
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_016008_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016008_15
TS23: thymus primordium Weak Regionally restricted euxassay_016008_15
TS23: liver lobe Moderate Regionally restricted euxassay_016008_15
TS23: upper jaw incisor Moderate Regionally restricted euxassay_016008_15
TS23: lower jaw incisor Moderate Regionally restricted euxassay_016008_15
TS23: midgut Moderate Regionally restricted euxassay_016008_15
TS23: hindgut Moderate Regionally restricted euxassay_016008_15
TS23: lung Moderate Regionally restricted euxassay_016008_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_016008_15
TS23: bladder Weak Regionally restricted euxassay_016008_15

Specimen euxassay_016008_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_16
TS23: olfactory cortex ventricular layer Strong Uniform euxassay_016008_16
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016008_16
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_016008_16
TS23: thymus primordium Weak Regionally restricted euxassay_016008_16
TS23: liver lobe Weak Regionally restricted euxassay_016008_16
TS23: lower jaw incisor Moderate Regionally restricted euxassay_016008_16
TS23: lung Weak Regionally restricted euxassay_016008_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_016008_16
TS23: bladder Weak Regionally restricted euxassay_016008_16

Specimen euxassay_016008_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_17
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016008_17
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_016008_17
TS23: thymus primordium Moderate Regionally restricted euxassay_016008_17
TS23: thyroid gland Weak Regionally restricted euxassay_016008_17
TS23: liver lobe Moderate Regionally restricted euxassay_016008_17
TS23: metanephros Moderate Regionally restricted euxassay_016008_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_016008_17
TS23: lung Moderate Regionally restricted euxassay_016008_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_016008_17

Specimen euxassay_016008_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_18
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016008_18
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_016008_18
TS23: liver lobe Moderate Regionally restricted euxassay_016008_18
TS23: metanephros Moderate Regionally restricted euxassay_016008_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_016008_18
TS23: vibrissa Moderate Regionally restricted euxassay_016008_18
TS23: lung Moderate Regionally restricted euxassay_016008_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_016008_18

Specimen euxassay_016008_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_19
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_016008_19
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_016008_19
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_016008_19
TS23: liver lobe Moderate Regionally restricted euxassay_016008_19
TS23: metanephros Weak Regionally restricted euxassay_016008_19
TS23: upper jaw molar Moderate Regionally restricted euxassay_016008_19
TS23: lower jaw molar Moderate Regionally restricted euxassay_016008_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_016008_19
TS23: vibrissa Moderate Regionally restricted euxassay_016008_19
TS23: lung Moderate Regionally restricted euxassay_016008_19

Specimen euxassay_016008_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_20
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_016008_20
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_016008_20
TS23: liver lobe Moderate Regionally restricted euxassay_016008_20
TS23: metanephros Weak Regionally restricted euxassay_016008_20
TS23: upper jaw molar Weak Regionally restricted euxassay_016008_20
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_016008_20
TS23: vibrissa Moderate Regionally restricted euxassay_016008_20
TS23: lung Moderate Regionally restricted euxassay_016008_20

Specimen euxassay_016008_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_21
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_016008_21
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_016008_21
TS23: liver lobe Moderate Regionally restricted euxassay_016008_21
TS23: metanephros Moderate Regionally restricted euxassay_016008_21
TS23: vibrissa Moderate Regionally restricted euxassay_016008_21
TS23: lung Moderate Regionally restricted euxassay_016008_21

Specimen euxassay_016008_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_22
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_016008_22
TS23: liver lobe Moderate Regionally restricted euxassay_016008_22
TS23: neural retina Weak Regionally restricted euxassay_016008_22
TS23: lung Moderate Regionally restricted euxassay_016008_22

Specimen euxassay_016008_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_23
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_016008_23
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_016008_23
TS23: liver lobe Moderate Regionally restricted euxassay_016008_23
TS23: neural retina Weak Regionally restricted euxassay_016008_23
TS23: lung Moderate Regionally restricted euxassay_016008_23

Specimen euxassay_016008_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_24
TS23: liver lobe Weak Regionally restricted euxassay_016008_24
TS23: neural retina Moderate Regionally restricted euxassay_016008_24
TS23: lung Weak Regionally restricted euxassay_016008_24

Specimen euxassay_016008_25: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_016008_25
TS23: telencephalon ventricular layer Strong Uniform euxassay_016008_25
TS23: liver lobe Weak Regionally restricted euxassay_016008_25
TS23: hindlimb digit 1 phalanx Weak Regionally restricted euxassay_016008_25
TS23: hindlimb digit 2 phalanx Weak Regionally restricted euxassay_016008_25
TS23: hindlimb digit 3 phalanx Weak Regionally restricted euxassay_016008_25
TS23: hindlimb digit 4 phalanx Weak Regionally restricted euxassay_016008_25
TS23: hindlimb digit 5 phalanx Weak Regionally restricted euxassay_016008_25
TS23: neural retina Moderate Regionally restricted euxassay_016008_25
TS23: lung Weak Regionally restricted euxassay_016008_25

Specimen euxassay_016008_26: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_016008_26
TS23: liver lobe Weak Regionally restricted euxassay_016008_26
TS23: hindlimb digit 1 phalanx Weak Regionally restricted euxassay_016008_26
TS23: hindlimb digit 2 phalanx Weak Regionally restricted euxassay_016008_26
TS23: hindlimb digit 3 phalanx Weak Regionally restricted euxassay_016008_26
TS23: neural retina Moderate Regionally restricted euxassay_016008_26


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory