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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828990
Gene symbol: Ttc39c
Gene name: tetratricopeptide repeat domain 39C
Probe: IMAGE clone 2780732
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007378_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_007378_02

Specimen euxassay_007378_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_03
TS23: brain Moderate Regionally restricted euxassay_007378_03

Specimen euxassay_007378_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_04
TS23: facial ganglion Moderate Regionally restricted euxassay_007378_04
TS23: brain Moderate Regionally restricted euxassay_007378_04

Specimen euxassay_007378_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: adrenal medulla Strong Regionally restricted euxassay_007378_05
TS23: seminiferous cord Moderate Regionally restricted euxassay_007378_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007378_05
TS23: facial ganglion Moderate Regionally restricted euxassay_007378_05
TS23: brain Moderate Regionally restricted euxassay_007378_05

Specimen euxassay_007378_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: adrenal medulla Strong Regionally restricted euxassay_007378_06
TS23: seminiferous cord Moderate Regionally restricted euxassay_007378_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007378_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007378_06
TS23: anterior naris Strong Regionally restricted euxassay_007378_06
TS23: external naris Strong Regionally restricted euxassay_007378_06
TS23: brain Moderate Regionally restricted euxassay_007378_06

Specimen euxassay_007378_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: adrenal medulla Strong Regionally restricted euxassay_007378_07
TS23: seminiferous cord Moderate Regionally restricted euxassay_007378_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007378_07
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007378_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_07
TS23: vagus ganglion Moderate Regionally restricted euxassay_007378_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007378_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007378_07
TS23: anterior naris Strong Regionally restricted euxassay_007378_07
TS23: brain Moderate Regionally restricted euxassay_007378_07

Specimen euxassay_007378_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007378_08
TS23: brain Moderate Regionally restricted euxassay_007378_08

Specimen euxassay_007378_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007378_09
TS23: anterior naris Strong Regionally restricted euxassay_007378_09
TS23: brain Strong Regionally restricted euxassay_007378_09
TS23: spinal cord Moderate Regionally restricted euxassay_007378_09
TS23: clavicle Strong Regionally restricted euxassay_007378_09

Specimen euxassay_007378_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007378_10
TS23: anterior naris Strong Regionally restricted euxassay_007378_10
TS23: external naris Strong Regionally restricted euxassay_007378_10
TS23: brain Moderate Regionally restricted euxassay_007378_10
TS23: spinal cord Moderate Regionally restricted euxassay_007378_10

Specimen euxassay_007378_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: external naris Strong Regionally restricted euxassay_007378_11
TS23: brain Moderate Regionally restricted euxassay_007378_11
TS23: spinal cord Moderate Regionally restricted euxassay_007378_11

Specimen euxassay_007378_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_007378_12
TS23: spinal cord Moderate Regionally restricted euxassay_007378_12

Specimen euxassay_007378_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_007378_13
TS23: spinal cord Moderate Regionally restricted euxassay_007378_13

Specimen euxassay_007378_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: adrenal medulla Strong Regionally restricted euxassay_007378_14
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007378_14
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007378_14
TS23: brain Moderate Regionally restricted euxassay_007378_14
TS23: spinal cord Moderate Regionally restricted euxassay_007378_14
TS23: clavicle Strong Regionally restricted euxassay_007378_14

Specimen euxassay_007378_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: adrenal medulla Strong Regionally restricted euxassay_007378_15
TS23: seminiferous cord Moderate Regionally restricted euxassay_007378_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007378_15
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_15
TS23: brain Moderate Regionally restricted euxassay_007378_15
TS23: spinal cord Moderate Regionally restricted euxassay_007378_15

Specimen euxassay_007378_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: adrenal medulla Strong Regionally restricted euxassay_007378_16
TS23: seminiferous cord Moderate Regionally restricted euxassay_007378_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007378_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_16
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007378_16
TS23: brain Moderate Regionally restricted euxassay_007378_16
TS23: spinal cord Moderate Regionally restricted euxassay_007378_16

Specimen euxassay_007378_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: seminiferous cord Moderate Regionally restricted euxassay_007378_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007378_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_17
TS23: vagus ganglion Moderate Regionally restricted euxassay_007378_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007378_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007378_17
TS23: brain Moderate Regionally restricted euxassay_007378_17
TS23: spinal cord Moderate Regionally restricted euxassay_007378_17

Specimen euxassay_007378_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: seminiferous cord Moderate Regionally restricted euxassay_007378_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007378_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007378_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_18
TS23: facial ganglion Moderate Regionally restricted euxassay_007378_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007378_18
TS23: brain Moderate Regionally restricted euxassay_007378_18

Specimen euxassay_007378_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_19
TS23: facial ganglion Moderate Regionally restricted euxassay_007378_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007378_19
TS23: brain Moderate Regionally restricted euxassay_007378_19

Specimen euxassay_007378_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_20
TS23: facial ganglion Moderate Regionally restricted euxassay_007378_20
TS23: brain Moderate Regionally restricted euxassay_007378_20

Specimen euxassay_007378_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007378_21


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory