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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828169
Gene symbol: Slc27a1
Gene name: solute carrier family 27 (fatty acid transporter), member 1
Probe: T30252
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: cerebral cortex Moderate
TS23: thalamus Moderate
TS23: cerebellum Strong
TS23: hypothalamus Strong
TS23: medulla oblongata Strong
TS23: midbrain Strong
TS23: pons Strong
TS23: choroid plexus Weak

Specimen euxassay_010364_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ear Moderate Regionally restricted euxassay_010364_01

Specimen euxassay_010364_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_02
TS23: ear Moderate Regionally restricted euxassay_010364_02

Specimen euxassay_010364_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010364_03
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_03
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_010364_03
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_03
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_03
TS23: ear Moderate Regionally restricted euxassay_010364_03

Specimen euxassay_010364_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010364_04
TS23: facial ganglion Moderate Regionally restricted euxassay_010364_04
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_010364_04
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_04
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_04
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_04
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_010364_04

Specimen euxassay_010364_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_010364_05
TS23: trigeminal ganglion Weak Regionally restricted euxassay_010364_05
TS23: facial ganglion Weak Regionally restricted euxassay_010364_05
TS23: ovary Moderate Regionally restricted euxassay_010364_05
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_05
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_05
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_05
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_05

Specimen euxassay_010364_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_010364_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010364_06
TS23: trigeminal ganglion Weak Regionally restricted euxassay_010364_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010364_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010364_06
TS23: ovary Moderate Regionally restricted euxassay_010364_06
TS23: stomach mesentery Moderate Regionally restricted euxassay_010364_06
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_06
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_06
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_06
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_06

Specimen euxassay_010364_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_010364_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010364_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010364_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010364_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_010364_07
TS23: facial ganglion Weak Regionally restricted euxassay_010364_07
TS23: vagus ganglion Weak Regionally restricted euxassay_010364_07
TS23: ovary Moderate Regionally restricted euxassay_010364_07
TS23: stomach mesentery Moderate Regionally restricted euxassay_010364_07
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010364_07
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_07
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_010364_07
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_07
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_07

Specimen euxassay_010364_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_010364_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010364_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_010364_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_010364_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010364_08
TS23: trigeminal ganglion Weak Regionally restricted euxassay_010364_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010364_08
TS23: stomach mesentery Moderate Regionally restricted euxassay_010364_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010364_08
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_08
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_08
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_08
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_08

Specimen euxassay_010364_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_010364_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010364_09
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_010364_09
TS23: stomach mesentery Moderate Regionally restricted euxassay_010364_09
TS23: pancreas Moderate Regionally restricted euxassay_010364_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010364_09
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_09
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_09
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_09
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_09
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_010364_09
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_010364_09

Specimen euxassay_010364_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010364_10
TS23: heart valve Moderate Regionally restricted euxassay_010364_10
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_010364_10
TS23: stomach mesentery Moderate Regionally restricted euxassay_010364_10
TS23: pancreas Weak Regionally restricted euxassay_010364_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010364_10
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_10
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_10
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_010364_10
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_10
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_10
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_010364_10

Specimen euxassay_010364_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart valve Weak Regionally restricted euxassay_010364_11
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_010364_11
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_010364_11
TS23: pancreas Weak Regionally restricted euxassay_010364_11
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_010364_11
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_010364_11
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010364_11
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_010364_11
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_11
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_11
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_11
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_010364_11

Specimen euxassay_010364_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_010364_12
TS23: upper jaw incisor Moderate Regionally restricted euxassay_010364_12
TS23: heart valve Weak Regionally restricted euxassay_010364_12
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_010364_12
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_010364_12
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010364_12
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_010364_12
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_12
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_12
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_12
TS23: spinal cord ventricular layer Strong Regionally restricted euxassay_010364_12

Specimen euxassay_010364_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: heart valve Moderate Regionally restricted euxassay_010364_13
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_010364_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010364_13
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_010364_13
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_010364_13
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_13
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_13
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_13

Specimen euxassay_010364_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_010364_14
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_010364_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010364_14
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_010364_14
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_14
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_14
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_14

Specimen euxassay_010364_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_010364_15
TS23: axial skeleton tail region Moderate Regionally restricted euxassay_010364_15
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_010364_15
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010364_15
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_15
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_15
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_15

Specimen euxassay_010364_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010364_16
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010364_16
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_16
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_010364_16
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_16
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_16
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_16

Specimen euxassay_010364_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010364_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010364_17
TS23: trigeminal ganglion Weak Regionally restricted euxassay_010364_17
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_010364_17
TS23: vagus ganglion Weak Regionally restricted euxassay_010364_17
TS23: ovary Moderate Regionally restricted euxassay_010364_17
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_17
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_010364_17
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_17
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_17
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_17

Specimen euxassay_010364_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010364_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_010364_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010364_18
TS23: ovary Moderate Regionally restricted euxassay_010364_18
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_18
TS23: medulla oblongata alar plate ventricular layer Strong Regionally restricted euxassay_010364_18
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_18
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_18

Specimen euxassay_010364_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010364_19
TS23: upper jaw molar Moderate Regionally restricted euxassay_010364_19
TS23: lower jaw molar Moderate Regionally restricted euxassay_010364_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010364_19
TS23: trigeminal ganglion Weak Regionally restricted euxassay_010364_19
TS23: ovary Moderate Regionally restricted euxassay_010364_19
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_19
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_19
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_19

Specimen euxassay_010364_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_010364_20
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_010364_20
TS23: upper jaw molar Moderate Regionally restricted euxassay_010364_20
TS23: trigeminal ganglion Weak Regionally restricted euxassay_010364_20
TS23: facial ganglion Weak Regionally restricted euxassay_010364_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010364_20
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_20
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_010364_20
TS23: pons ventricular layer Strong Regionally restricted euxassay_010364_20
TS23: metencephalon part of 4th ventricle choroid plexus Strong Regionally restricted euxassay_010364_20

Specimen euxassay_010364_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_010364_21
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010364_21
TS23: trigeminal ganglion Weak Regionally restricted euxassay_010364_21
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_010364_21
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_010364_21
TS23: forelimb digit 4 phalanx Moderate Regionally restricted euxassay_010364_21
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_010364_21
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_010364_21
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_21

Specimen euxassay_010364_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_010364_22
TS23: trigeminal ganglion Weak Regionally restricted euxassay_010364_22
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_010364_22
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_010364_22
TS23: forelimb digit 4 phalanx Moderate Regionally restricted euxassay_010364_22
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_22
TS23: ear Moderate Regionally restricted euxassay_010364_22

Specimen euxassay_010364_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_010364_23
TS23: forelimb digit 2 phalanx Moderate Regionally restricted euxassay_010364_23
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_010364_23
TS23: forelimb digit 4 phalanx Moderate Regionally restricted euxassay_010364_23
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_010364_23
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_010364_23
TS23: tail mesenchyme Strong Regionally restricted euxassay_010364_23
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010364_23
TS23: ear Moderate Regionally restricted euxassay_010364_23

Specimen euxassay_010364_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_010364_24


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/19/2021
MGI 6.17
The Jackson Laboratory