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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827784
Gene symbol: Rnpc3
Gene name: RNA-binding region (RNP1, RRM) containing 3
Probe: T30998
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013667_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_01

Specimen euxassay_013667_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_02

Specimen euxassay_013667_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_03

Specimen euxassay_013667_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_04
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_04

Specimen euxassay_013667_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_05
TS23: facial ganglion Moderate Regionally restricted euxassay_013667_05
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_05
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013667_05

Specimen euxassay_013667_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_06
TS23: facial ganglion Moderate Regionally restricted euxassay_013667_06
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_06
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_06
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_06
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013667_06

Specimen euxassay_013667_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_013667_07
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_07
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_07
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013667_07

Specimen euxassay_013667_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_013667_08
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_08
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_08
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_08
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013667_08
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_08

Specimen euxassay_013667_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_013667_09
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_013667_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013667_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_09
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_09
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_09
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_09
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013667_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_09

Specimen euxassay_013667_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_013667_10
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_10
TS23: vagus ganglion Moderate Regionally restricted euxassay_013667_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013667_10
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_10
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_10
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013667_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_013667_10

Specimen euxassay_013667_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013667_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_11
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_11
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_11
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_11
TS23: ventral grey horn Weak Regionally restricted euxassay_013667_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_013667_11

Specimen euxassay_013667_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_12
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_12
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_12
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_12
TS23: ventral grey horn Weak Regionally restricted euxassay_013667_12

Specimen euxassay_013667_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_13
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_13
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_13
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_13
TS23: ventral grey horn Weak Regionally restricted euxassay_013667_13
TS23: vomeronasal organ Weak Regionally restricted euxassay_013667_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_013667_13

Specimen euxassay_013667_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_14
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_14
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_14
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_14
TS23: ventral grey horn Weak Regionally restricted euxassay_013667_14

Specimen euxassay_013667_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013667_15
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_15
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_15
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_15
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_15
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013667_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_15
TS23: ventral grey horn Weak Regionally restricted euxassay_013667_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_013667_15

Specimen euxassay_013667_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013667_16
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_16
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_16
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_16
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013667_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_16
TS23: ventral grey horn Weak Regionally restricted euxassay_013667_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_013667_16

Specimen euxassay_013667_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013667_17
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_17
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_17
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_17
TS23: pons marginal layer Weak Regionally restricted euxassay_013667_17
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013667_17
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_17
TS23: ventral grey horn Weak Regionally restricted euxassay_013667_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_013667_17

Specimen euxassay_013667_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_013667_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013667_18
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_18
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_18
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_18
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_18
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_18
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_013667_18
TS23: ventral grey horn Weak Regionally restricted euxassay_013667_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_013667_18

Specimen euxassay_013667_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_013667_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_013667_19
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_19
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013667_19
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_19
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013667_19
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013667_19

Specimen euxassay_013667_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_013667_20
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_013667_20
TS23: dorsal root ganglion Weak Regionally restricted euxassay_013667_20
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_20
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_20

Specimen euxassay_013667_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_21
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_013667_21
TS23: facial ganglion Moderate Regionally restricted euxassay_013667_21
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_013667_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_21
TS23: pons mantle layer Weak Regionally restricted euxassay_013667_21

Specimen euxassay_013667_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_22
TS23: facial ganglion Moderate Regionally restricted euxassay_013667_22
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_22

Specimen euxassay_013667_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_013667_23
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013667_23


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory