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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827411
Gene symbol: Prickle1
Gene name: prickle planar cell polarity protein 1
Probe: T36893
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009520_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_009520_01
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_009520_01
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_009520_01
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_009520_01
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_009520_01

Specimen euxassay_009520_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 metatarsal Moderate Regionally restricted euxassay_009520_02
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_009520_02
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_009520_02
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_009520_02
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_009520_02

Specimen euxassay_009520_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_009520_03
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_009520_03
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_009520_03
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_009520_03
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_009520_03
TS23: forelimb digit 3 phalanx Strong Regionally restricted euxassay_009520_03
TS23: forelimb digit 4 phalanx Strong Regionally restricted euxassay_009520_03
TS23: forelimb digit 2 phalanx Strong Regionally restricted euxassay_009520_03
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_03

Specimen euxassay_009520_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_009520_04
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_009520_04
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_009520_04
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_009520_04
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_009520_04
TS23: forelimb digit 3 phalanx Strong Regionally restricted euxassay_009520_04
TS23: forelimb digit 4 phalanx Strong Regionally restricted euxassay_009520_04
TS23: urinary system Strong Regionally restricted euxassay_009520_04
TS23: mesonephros Present euxassay_009520_04
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_04

Specimen euxassay_009520_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: forelimb digit 3 phalanx Strong Regionally restricted euxassay_009520_05
TS23: urinary system Strong Regionally restricted euxassay_009520_05
TS23: mesonephros Present euxassay_009520_05
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_05

Specimen euxassay_009520_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_06
TS23: otic capsule Moderate Regionally restricted euxassay_009520_06
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_06
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_06

Specimen euxassay_009520_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_07
TS23: otic capsule Moderate Regionally restricted euxassay_009520_07
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_07
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_07

Specimen euxassay_009520_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_08
TS23: otic capsule Moderate Regionally restricted euxassay_009520_08
TS23: tongue epithelium Moderate Regionally restricted euxassay_009520_08
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_08
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_009520_08

Specimen euxassay_009520_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_09
TS23: naris Strong Regionally restricted euxassay_009520_09
TS23: otic capsule Moderate Regionally restricted euxassay_009520_09
TS23: tongue epithelium Strong Regionally restricted euxassay_009520_09
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_09
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009520_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_009520_09
TS23: heart valve Moderate Regionally restricted euxassay_009520_09

Specimen euxassay_009520_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naris Strong Regionally restricted euxassay_009520_10
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_10
TS23: tongue epithelium Strong Regionally restricted euxassay_009520_10
TS23: lower jaw incisor Moderate Regionally restricted euxassay_009520_10
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_10
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_10
TS23: pituitary gland Strong Regionally restricted euxassay_009520_10
TS23: heart valve Moderate Regionally restricted euxassay_009520_10

Specimen euxassay_009520_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naris Strong Regionally restricted euxassay_009520_11
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_11
TS23: tongue epithelium Moderate Regionally restricted euxassay_009520_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_009520_11
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_11
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_009520_11
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_11
TS23: basal columns Weak Regionally restricted euxassay_009520_11
TS23: pituitary gland Strong Regionally restricted euxassay_009520_11
TS23: heart valve Moderate Regionally restricted euxassay_009520_11

Specimen euxassay_009520_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naris Strong Regionally restricted euxassay_009520_12
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_12
TS23: tongue epithelium Strong Regionally restricted euxassay_009520_12
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_12
TS23: urethra Moderate Regionally restricted euxassay_009520_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_12
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_009520_12
TS23: basal columns Weak Regionally restricted euxassay_009520_12
TS23: pituitary gland Strong Regionally restricted euxassay_009520_12
TS23: heart valve Moderate Regionally restricted euxassay_009520_12

Specimen euxassay_009520_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naris Strong Regionally restricted euxassay_009520_13
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_13
TS23: tongue epithelium Strong Regionally restricted euxassay_009520_13
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_13
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_009520_13
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009520_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_009520_13
TS23: pituitary gland Strong Regionally restricted euxassay_009520_13
TS23: heart valve Moderate Regionally restricted euxassay_009520_13

Specimen euxassay_009520_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: naris Strong Regionally restricted euxassay_009520_14
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_14
TS23: tongue epithelium Strong Regionally restricted euxassay_009520_14
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_14
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_14
TS23: pituitary gland Strong Regionally restricted euxassay_009520_14

Specimen euxassay_009520_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_15
TS23: tongue epithelium Strong Regionally restricted euxassay_009520_15
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009520_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_009520_15
TS23: pituitary gland Strong Regionally restricted euxassay_009520_15

Specimen euxassay_009520_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_009520_16
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_009520_16
TS23: turbinate bone primordium Strong Regionally restricted euxassay_009520_16
TS23: otic capsule Weak Regionally restricted euxassay_009520_16
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_16
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_009520_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009520_16

Specimen euxassay_009520_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_009520_17
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_009520_17
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_009520_17
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_009520_17
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_009520_17
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_009520_17
TS23: otic capsule Weak Regionally restricted euxassay_009520_17
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_17
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_009520_17

Specimen euxassay_009520_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_009520_18
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_009520_18
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_009520_18
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_009520_18
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_009520_18
TS23: forelimb digit 4 phalanx Strong Regionally restricted euxassay_009520_18
TS23: forelimb digit 3 phalanx Strong Regionally restricted euxassay_009520_18
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_009520_18
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_18
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_009520_18

Specimen euxassay_009520_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forelimb digit 3 phalanx Strong Regionally restricted euxassay_009520_19
TS23: forelimb digit 4 phalanx Strong Regionally restricted euxassay_009520_19
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_009520_19
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_009520_19
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_009520_19
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_009520_19
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_009520_19
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_19
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_19

Specimen euxassay_009520_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hindlimb digit 5 phalanx Strong Regionally restricted euxassay_009520_20
TS23: hindlimb digit 4 phalanx Strong Regionally restricted euxassay_009520_20
TS23: hindlimb digit 3 phalanx Strong Regionally restricted euxassay_009520_20
TS23: hindlimb digit 2 phalanx Strong Regionally restricted euxassay_009520_20
TS23: hindlimb digit 1 phalanx Strong Regionally restricted euxassay_009520_20
TS23: forelimb digit 3 phalanx Strong Regionally restricted euxassay_009520_20
TS23: forelimb digit 4 phalanx Strong Regionally restricted euxassay_009520_20
TS23: forelimb digit 2 phalanx Strong Regionally restricted euxassay_009520_20
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_20
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_20

Specimen euxassay_009520_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_009520_21
TS23: hindlimb digit 1 phalanx Moderate Regionally restricted euxassay_009520_21
TS23: hindlimb digit 2 phalanx Moderate Regionally restricted euxassay_009520_21
TS23: hindlimb digit 3 phalanx Moderate Regionally restricted euxassay_009520_21
TS23: hindlimb digit 4 phalanx Moderate Regionally restricted euxassay_009520_21
TS23: hindlimb digit 5 phalanx Moderate Regionally restricted euxassay_009520_21
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_21
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_21

Specimen euxassay_009520_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: forelimb digit 3 phalanx Moderate Regionally restricted euxassay_009520_22
TS23: forelimb digit 4 phalanx Moderate Regionally restricted euxassay_009520_22
TS23: nephric duct of male Strong Regionally restricted euxassay_009520_22
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_22

Specimen euxassay_009520_23: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: forelimb digit 3 phalanx Strong Regionally restricted euxassay_009520_23
TS23: forelimb digit 4 phalanx Strong Regionally restricted euxassay_009520_23
TS23: urinary system Strong Regionally restricted euxassay_009520_23
TS23: mesonephros Present euxassay_009520_23
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_009520_23


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last database update
11/16/2021
MGI 6.17
The Jackson Laboratory