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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827354
Gene symbol: Ppfia4
Gene name: protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
Probe: T36885
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009512_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Weak Regionally restricted euxassay_009512_01
TS23: foot Moderate Regionally restricted euxassay_009512_01
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_009512_01
TS23: brain Moderate Regionally restricted euxassay_009512_01

Specimen euxassay_009512_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_02
TS23: diaphragm Moderate Regionally restricted euxassay_009512_02
TS23: upper leg muscle Moderate Regionally restricted euxassay_009512_02
TS23: eye skeletal muscle Moderate Regionally restricted euxassay_009512_02
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_009512_02
TS23: brain Moderate Regionally restricted euxassay_009512_02

Specimen euxassay_009512_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_03
TS23: diaphragm Moderate Regionally restricted euxassay_009512_03
TS23: upper leg muscle Moderate Regionally restricted euxassay_009512_03
TS23: upper arm muscle Moderate Regionally restricted euxassay_009512_03
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_009512_03
TS23: brain Moderate Regionally restricted euxassay_009512_03

Specimen euxassay_009512_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_04
TS23: diaphragm Moderate Regionally restricted euxassay_009512_04
TS23: upper leg muscle Moderate Regionally restricted euxassay_009512_04
TS23: upper arm muscle Moderate Regionally restricted euxassay_009512_04
TS23: eye skeletal muscle Moderate Regionally restricted euxassay_009512_04
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_009512_04
TS23: brain Weak Regionally restricted euxassay_009512_04

Specimen euxassay_009512_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_05
TS23: diaphragm Moderate Regionally restricted euxassay_009512_05
TS23: tongue muscle Moderate Regionally restricted euxassay_009512_05
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_009512_05
TS23: brain Moderate Regionally restricted euxassay_009512_05

Specimen euxassay_009512_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_06
TS23: tongue muscle Moderate Regionally restricted euxassay_009512_06
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_009512_06
TS23: brain Moderate Regionally restricted euxassay_009512_06
TS23: spinal cord Moderate Regionally restricted euxassay_009512_06

Specimen euxassay_009512_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: extraembryonic component Moderate Regionally restricted euxassay_009512_07
TS23: diaphragm Moderate Regionally restricted euxassay_009512_07
TS23: tongue muscle Moderate Regionally restricted euxassay_009512_07
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_009512_07
TS23: brain Moderate Regionally restricted euxassay_009512_07
TS23: spinal cord Moderate Regionally restricted euxassay_009512_07

Specimen euxassay_009512_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_08
TS23: diaphragm Moderate Regionally restricted euxassay_009512_08
TS23: tongue muscle Moderate Regionally restricted euxassay_009512_08
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_009512_08
TS23: brain Moderate Regionally restricted euxassay_009512_08
TS23: spinal cord Moderate Regionally restricted euxassay_009512_08

Specimen euxassay_009512_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_09
TS23: diaphragm Moderate Regionally restricted euxassay_009512_09
TS23: tongue muscle Moderate Regionally restricted euxassay_009512_09
TS23: brain Moderate Regionally restricted euxassay_009512_09
TS23: spinal cord Moderate Regionally restricted euxassay_009512_09

Specimen euxassay_009512_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_10
TS23: diaphragm Moderate Regionally restricted euxassay_009512_10
TS23: upper leg muscle Moderate Regionally restricted euxassay_009512_10
TS23: tongue muscle Moderate Regionally restricted euxassay_009512_10
TS23: brain Moderate Regionally restricted euxassay_009512_10
TS23: spinal cord Moderate Regionally restricted euxassay_009512_10

Specimen euxassay_009512_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_11
TS23: diaphragm Moderate Regionally restricted euxassay_009512_11
TS23: upper leg muscle Moderate Regionally restricted euxassay_009512_11
TS23: foot Moderate Regionally restricted euxassay_009512_11
TS23: brain Moderate Regionally restricted euxassay_009512_11
TS23: spinal cord Moderate Regionally restricted euxassay_009512_11

Specimen euxassay_009512_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_12
TS23: diaphragm Moderate Regionally restricted euxassay_009512_12
TS23: upper leg muscle Moderate Regionally restricted euxassay_009512_12
TS23: foot Moderate Regionally restricted euxassay_009512_12
TS23: brain Moderate Regionally restricted euxassay_009512_12
TS23: spinal cord Moderate Regionally restricted euxassay_009512_12

Specimen euxassay_009512_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_13
TS23: diaphragm Moderate Regionally restricted euxassay_009512_13
TS23: upper leg muscle Moderate Regionally restricted euxassay_009512_13
TS23: foot Moderate Regionally restricted euxassay_009512_13
TS23: eye skeletal muscle Moderate Regionally restricted euxassay_009512_13
TS23: brain Moderate Regionally restricted euxassay_009512_13
TS23: spinal cord Moderate Regionally restricted euxassay_009512_13

Specimen euxassay_009512_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_14
TS23: diaphragm Moderate Regionally restricted euxassay_009512_14
TS23: upper leg muscle Moderate Regionally restricted euxassay_009512_14
TS23: eye skeletal muscle Moderate Regionally restricted euxassay_009512_14
TS23: brain Moderate Regionally restricted euxassay_009512_14
TS23: spinal cord Moderate Regionally restricted euxassay_009512_14

Specimen euxassay_009512_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_15
TS23: diaphragm Moderate Regionally restricted euxassay_009512_15
TS23: upper leg muscle Moderate Regionally restricted euxassay_009512_15
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_009512_15
TS23: eye skeletal muscle Moderate Regionally restricted euxassay_009512_15
TS23: brain Moderate Regionally restricted euxassay_009512_15

Specimen euxassay_009512_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_16
TS23: diaphragm Moderate Regionally restricted euxassay_009512_16
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_009512_16
TS23: upper leg muscle Moderate Regionally restricted euxassay_009512_16
TS23: eye skeletal muscle Moderate Regionally restricted euxassay_009512_16
TS23: brain Moderate Regionally restricted euxassay_009512_16

Specimen euxassay_009512_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_17
TS23: diaphragm Moderate Regionally restricted euxassay_009512_17
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_009512_17
TS23: upper arm muscle Moderate Regionally restricted euxassay_009512_17
TS23: hand Moderate Regionally restricted euxassay_009512_17
TS23: eye skeletal muscle Moderate Regionally restricted euxassay_009512_17
TS23: brain Moderate Regionally restricted euxassay_009512_17

Specimen euxassay_009512_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Moderate Regionally restricted euxassay_009512_18
TS23: diaphragm Moderate Regionally restricted euxassay_009512_18
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_009512_18
TS23: upper arm muscle Moderate Regionally restricted euxassay_009512_18
TS23: hand Moderate Regionally restricted euxassay_009512_18
TS23: eye skeletal muscle Moderate Regionally restricted euxassay_009512_18
TS23: brain Moderate Regionally restricted euxassay_009512_18


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
01/14/2020
MGI 6.14
The Jackson Laboratory