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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827127
Gene symbol: Pdgfc
Gene name: platelet-derived growth factor, C polypeptide
Probe: MGC clone 46836
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_003799_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_01
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_01
TS23: upper arm mesenchyme Strong Regionally restricted euxassay_003799_01
TS23: shoulder mesenchyme Strong Regionally restricted euxassay_003799_01
TS23: forearm mesenchyme Strong Regionally restricted euxassay_003799_01
TS23: elbow mesenchyme Strong Regionally restricted euxassay_003799_01
TS23: knee mesenchyme Strong Regionally restricted euxassay_003799_01
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_003799_01
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_003799_01
Specimen euxassay_003799_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_02
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_02
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_003799_02
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_003799_02
TS23: knee mesenchyme Strong Regionally restricted euxassay_003799_02
TS23: hip mesenchyme Strong Regionally restricted euxassay_003799_02
TS23: upper arm mesenchyme Strong Regionally restricted euxassay_003799_02
TS23: shoulder mesenchyme Strong Regionally restricted euxassay_003799_02
TS23: forearm mesenchyme Strong Regionally restricted euxassay_003799_02
TS23: elbow mesenchyme Strong Regionally restricted euxassay_003799_02
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003799_02
Specimen euxassay_003799_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_03
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_03
TS23: hand mesenchyme Strong Regionally restricted euxassay_003799_03
TS23: foot mesenchyme Strong Regionally restricted euxassay_003799_03
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_003799_03
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_003799_03
TS23: stomach Moderate Regionally restricted euxassay_003799_03
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003799_03
TS23: cochlear duct Strong Regionally restricted euxassay_003799_03
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_03
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_03
Specimen euxassay_003799_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_04
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_04
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_003799_04
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_003799_04
TS23: foot mesenchyme Strong Regionally restricted euxassay_003799_04
TS23: hand mesenchyme Strong Regionally restricted euxassay_003799_04
TS23: stomach Moderate Regionally restricted euxassay_003799_04
TS23: left lung Strong Regionally restricted euxassay_003799_04
TS23: cochlear duct Strong Regionally restricted euxassay_003799_04
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_04
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_04
Specimen euxassay_003799_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_05
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_05
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_003799_05
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_003799_05
TS23: foot mesenchyme Strong Regionally restricted euxassay_003799_05
TS23: hand mesenchyme Strong Regionally restricted euxassay_003799_05
TS23: stomach Moderate Regionally restricted euxassay_003799_05
TS23: left lung Strong Regionally restricted euxassay_003799_05
TS23: cochlear duct Strong Regionally restricted euxassay_003799_05
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_05
Specimen euxassay_003799_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_06
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_06
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_003799_06
TS23: foot mesenchyme Strong Regionally restricted euxassay_003799_06
TS23: hand mesenchyme Strong Regionally restricted euxassay_003799_06
TS23: stomach Moderate Regionally restricted euxassay_003799_06
TS23: left lung Strong Regionally restricted euxassay_003799_06
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003799_06
TS23: cochlear duct Strong Regionally restricted euxassay_003799_06
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_06
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003799_06
Specimen euxassay_003799_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_07
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_07
TS23: stomach Moderate Regionally restricted euxassay_003799_07
TS23: left lung Strong Regionally restricted euxassay_003799_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003799_07
TS23: cochlear duct Strong Regionally restricted euxassay_003799_07
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_07
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003799_07
TS23: renal cortex Moderate Regionally restricted euxassay_003799_07
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003799_07
Specimen euxassay_003799_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_08
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_08
TS23: stomach Moderate Regionally restricted euxassay_003799_08
TS23: left lung Strong Regionally restricted euxassay_003799_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003799_08
TS23: cochlear duct Strong Regionally restricted euxassay_003799_08
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_08
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003799_08
TS23: renal cortex Moderate Regionally restricted euxassay_003799_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003799_08
Specimen euxassay_003799_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_09
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_09
TS23: stomach Moderate Regionally restricted euxassay_003799_09
TS23: left lung Strong Regionally restricted euxassay_003799_09
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003799_09
TS23: cochlear duct Strong Regionally restricted euxassay_003799_09
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_09
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_09
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003799_09
TS23: renal cortex Moderate Regionally restricted euxassay_003799_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003799_09
Specimen euxassay_003799_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_10
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_10
TS23: stomach Moderate Regionally restricted euxassay_003799_10
TS23: left lung Strong Regionally restricted euxassay_003799_10
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003799_10
TS23: tongue epithelium Weak Regionally restricted euxassay_003799_10
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_10
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_10
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003799_10
TS23: renal cortex Moderate Regionally restricted euxassay_003799_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003799_10
Specimen euxassay_003799_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_11
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_11
TS23: tail mesenchyme Strong Regionally restricted euxassay_003799_11
TS23: stomach Moderate Regionally restricted euxassay_003799_11
TS23: left lung Strong Regionally restricted euxassay_003799_11
TS23: tongue muscle Weak Regionally restricted euxassay_003799_11
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_11
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_11
TS23: esophagus Moderate Regionally restricted euxassay_003799_11
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003799_11
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003799_11
Specimen euxassay_003799_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_12
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_12
TS23: tail mesenchyme Strong Regionally restricted euxassay_003799_12
TS23: midgut loop Moderate Regionally restricted euxassay_003799_12
TS23: hindgut Moderate Regionally restricted euxassay_003799_12
TS23: midgut Moderate Regionally restricted euxassay_003799_12
TS23: left lung Strong Regionally restricted euxassay_003799_12
TS23: tongue muscle Weak Regionally restricted euxassay_003799_12
TS23: bladder fundus Strong Regionally restricted euxassay_003799_12
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003799_12
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_12
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_12
TS23: esophagus Moderate Regionally restricted euxassay_003799_12
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003799_12
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003799_12
Specimen euxassay_003799_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_13
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_13
TS23: tail mesenchyme Strong Regionally restricted euxassay_003799_13
TS23: rectum Moderate Regionally restricted euxassay_003799_13
TS23: hindgut Moderate Regionally restricted euxassay_003799_13
TS23: midgut loop Moderate Regionally restricted euxassay_003799_13
TS23: midgut Moderate Regionally restricted euxassay_003799_13
TS23: left lung Strong Regionally restricted euxassay_003799_13
TS23: tongue muscle Weak Regionally restricted euxassay_003799_13
TS23: urethra Strong Regionally restricted euxassay_003799_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: bladder fundus Strong Regionally restricted euxassay_003799_13
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003799_13
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_13
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_13
TS23: esophagus Moderate Regionally restricted euxassay_003799_13
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_003799_13
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003799_13
TS23: naris Moderate Regionally restricted euxassay_003799_13
Specimen euxassay_003799_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_14
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_14
TS23: tail mesenchyme Strong Regionally restricted euxassay_003799_14
TS23: midgut loop Moderate Regionally restricted euxassay_003799_14
TS23: midgut Moderate Regionally restricted euxassay_003799_14
TS23: rectum Moderate Regionally restricted euxassay_003799_14
TS23: hindgut Moderate Regionally restricted euxassay_003799_14
TS23: right lung Strong Regionally restricted euxassay_003799_14
TS23: tongue muscle Weak Regionally restricted euxassay_003799_14
TS23: urethra Strong Regionally restricted euxassay_003799_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: bladder fundus Strong Regionally restricted euxassay_003799_14
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003799_14
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_14
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_14
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003799_14
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003799_14
Specimen euxassay_003799_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_15
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_15
TS23: tail mesenchyme Strong Regionally restricted euxassay_003799_15
TS23: midgut Moderate Regionally restricted euxassay_003799_15
TS23: hindgut Moderate Regionally restricted euxassay_003799_15
TS23: right lung Strong Regionally restricted euxassay_003799_15
TS23: tongue muscle Weak Regionally restricted euxassay_003799_15
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003799_15
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_15
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003799_15
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003799_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003799_15
Specimen euxassay_003799_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_16
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_16
TS23: tail mesenchyme Strong Regionally restricted euxassay_003799_16
TS23: hindgut Moderate Regionally restricted euxassay_003799_16
TS23: midgut Moderate Regionally restricted euxassay_003799_16
TS23: right lung Strong Regionally restricted euxassay_003799_16
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003799_16
TS23: tongue Weak Regionally restricted euxassay_003799_16
TS23: tongue muscle Weak Regionally restricted euxassay_003799_16
TS23: glans of male genital tubercle Moderate Regionally restricted euxassay_003799_16
TS23: cochlear duct Strong Regionally restricted euxassay_003799_16
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_16
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003799_16
TS23: renal cortex Moderate Regionally restricted euxassay_003799_16
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_003799_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003799_16
Specimen euxassay_003799_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_17
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_17
TS23: tail mesenchyme Strong Regionally restricted euxassay_003799_17
TS23: hindgut Moderate Regionally restricted euxassay_003799_17
TS23: midgut Moderate Regionally restricted euxassay_003799_17
TS23: right lung Strong Regionally restricted euxassay_003799_17
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003799_17
TS23: cochlear duct Strong Regionally restricted euxassay_003799_17
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_17
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003799_17
TS23: renal cortex Moderate Regionally restricted euxassay_003799_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003799_17
Specimen euxassay_003799_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_18
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_18
TS23: hindgut Moderate Regionally restricted euxassay_003799_18
TS23: midgut Moderate Regionally restricted euxassay_003799_18
TS23: right lung Strong Regionally restricted euxassay_003799_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003799_18
TS23: cochlea Strong Regionally restricted euxassay_003799_18
TS23: cochlear duct Strong Regionally restricted euxassay_003799_18
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_18
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003799_18
TS23: renal cortex Moderate Regionally restricted euxassay_003799_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003799_18
Specimen euxassay_003799_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_19
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_19
TS23: right lung Strong Regionally restricted euxassay_003799_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_003799_19
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_19
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_003799_19
TS23: renal cortex Moderate Regionally restricted euxassay_003799_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_003799_19
Specimen euxassay_003799_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_20
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_20
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_003799_20
TS23: foot mesenchyme Strong Regionally restricted euxassay_003799_20
TS23: right lung Strong Regionally restricted euxassay_003799_20
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_003799_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_003799_20
Specimen euxassay_003799_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_21
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_21
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_003799_21
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_003799_21
TS23: hand mesenchyme Strong Regionally restricted euxassay_003799_21
TS23: right lung Strong Regionally restricted euxassay_003799_21
Specimen euxassay_003799_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_22
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_22
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_003799_22
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_003799_22
TS23: foot mesenchyme Strong Regionally restricted euxassay_003799_22
TS23: right lung Strong Regionally restricted euxassay_003799_22
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003799_22
Specimen euxassay_003799_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_003799_23
TS23: vertebral axis musculature Strong Regionally restricted euxassay_003799_23
TS23: foot mesenchyme Strong Regionally restricted euxassay_003799_23
TS23: lower leg mesenchyme Strong Regionally restricted euxassay_003799_23
TS23: upper leg mesenchyme Strong Regionally restricted euxassay_003799_23
TS23: hand mesenchyme Strong Regionally restricted euxassay_003799_23
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_003799_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory