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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827037
Gene symbol: Pank1
Gene name: pantothenate kinase 1
Probe: MGC clone 32495
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001611_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_001611_01
TS23: neural retina Moderate Regionally restricted euxassay_001611_01

Specimen euxassay_001611_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_02
TS23: liver lobe Moderate Regionally restricted euxassay_001611_02
TS23: neural retina Moderate Regionally restricted euxassay_001611_02

Specimen euxassay_001611_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_03
TS23: liver lobe Moderate Regionally restricted euxassay_001611_03
TS23: neural retina Moderate Regionally restricted euxassay_001611_03

Specimen euxassay_001611_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_04
TS23: liver lobe Moderate Regionally restricted euxassay_001611_04
TS23: submandibular gland primordium Weak Regionally restricted euxassay_001611_04
TS23: vibrissa Moderate Regionally restricted euxassay_001611_04
TS23: neural retina Moderate Regionally restricted euxassay_001611_04

Specimen euxassay_001611_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_05
TS23: liver lobe Moderate Regionally restricted euxassay_001611_05
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_001611_05
TS23: vibrissa Moderate Regionally restricted euxassay_001611_05

Specimen euxassay_001611_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_06
TS23: liver lobe Moderate Regionally restricted euxassay_001611_06
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_001611_06
TS23: vibrissa Moderate Regionally restricted euxassay_001611_06

Specimen euxassay_001611_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_07
TS23: liver lobe Moderate Regionally restricted euxassay_001611_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_001611_07
TS23: vibrissa Moderate Regionally restricted euxassay_001611_07

Specimen euxassay_001611_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_08
TS23: liver lobe Moderate Regionally restricted euxassay_001611_08
TS23: midgut Moderate Regionally restricted euxassay_001611_08
TS23: thymus primordium Moderate Uniform euxassay_001611_08

Specimen euxassay_001611_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_09
TS23: liver lobe Moderate Regionally restricted euxassay_001611_09
TS23: midgut Moderate Regionally restricted euxassay_001611_09
TS23: thymus primordium Moderate Uniform euxassay_001611_09

Specimen euxassay_001611_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_10
TS23: liver lobe Moderate Regionally restricted euxassay_001611_10
TS23: midgut Moderate Regionally restricted euxassay_001611_10
TS23: thymus primordium Moderate Uniform euxassay_001611_10

Specimen euxassay_001611_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_11
TS23: liver lobe Moderate Regionally restricted euxassay_001611_11
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_001611_11
TS23: hindgut Moderate Regionally restricted euxassay_001611_11
TS23: midgut Moderate Regionally restricted euxassay_001611_11
TS23: thymus primordium Moderate Uniform euxassay_001611_11

Specimen euxassay_001611_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_12
TS23: liver lobe Moderate Regionally restricted euxassay_001611_12
TS23: midgut Moderate Regionally restricted euxassay_001611_12
TS23: hindgut Moderate Regionally restricted euxassay_001611_12
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_001611_12
TS23: urethra Moderate Regionally restricted euxassay_001611_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.

Specimen euxassay_001611_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_13
TS23: liver lobe Moderate Regionally restricted euxassay_001611_13
TS23: midgut Moderate Regionally restricted euxassay_001611_13
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_001611_13
TS23: hindgut Moderate Regionally restricted euxassay_001611_13
TS23: urethra Moderate Regionally restricted euxassay_001611_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.

Specimen euxassay_001611_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Moderate Regionally restricted euxassay_001611_14
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_001611_14
TS23: midgut Moderate Regionally restricted euxassay_001611_14

Specimen euxassay_001611_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_15
TS23: liver lobe Moderate Regionally restricted euxassay_001611_15
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_001611_15

Specimen euxassay_001611_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_16
TS23: liver lobe Moderate Regionally restricted euxassay_001611_16

Specimen euxassay_001611_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_17
TS23: liver lobe Moderate Regionally restricted euxassay_001611_17

Specimen euxassay_001611_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_18
TS23: liver lobe Moderate Regionally restricted euxassay_001611_18
TS23: vibrissa Moderate Regionally restricted euxassay_001611_18

Specimen euxassay_001611_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_19
TS23: liver lobe Moderate Regionally restricted euxassay_001611_19
TS23: vibrissa Moderate Regionally restricted euxassay_001611_19

Specimen euxassay_001611_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_20
TS23: liver lobe Moderate Regionally restricted euxassay_001611_20
TS23: vibrissa Moderate Regionally restricted euxassay_001611_20
TS23: neural retina Moderate Regionally restricted euxassay_001611_20

Specimen euxassay_001611_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_001611_21
TS23: neural retina Moderate Regionally restricted euxassay_001611_21

Specimen euxassay_001611_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Moderate Regionally restricted euxassay_001611_22


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory