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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826760
Gene symbol: Npc2
Gene name: NPC intracellular cholesterol transporter 2
Probe: IMAGE clone 1890275
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001964_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_01
TS23: stomach Moderate Regionally restricted euxassay_001964_01

Specimen euxassay_001964_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_02
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_02
TS23: stomach Moderate Regionally restricted euxassay_001964_02

Specimen euxassay_001964_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_03
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_03
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_03
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_03
TS23: stomach Strong Regionally restricted euxassay_001964_03

Specimen euxassay_001964_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_04
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_04
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_04
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_04
TS23: stomach Strong Regionally restricted euxassay_001964_04

Specimen euxassay_001964_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_05
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_05
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_05
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_001964_05 trigeminal motor nucleus
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_001964_05
TS23: stomach Strong Regionally restricted euxassay_001964_05

Specimen euxassay_001964_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_06
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_06
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_06
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_06
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_06
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_06
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_001964_06
TS23: stomach Strong Regionally restricted euxassay_001964_06

Specimen euxassay_001964_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_07
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_07
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_07
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_07
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_001964_07 facial motor nucleus
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_001964_07
TS23: ventral grey horn Moderate Regionally restricted euxassay_001964_07
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_001964_07
TS23: cervical ganglion Moderate Regionally restricted euxassay_001964_07
TS23: stomach Strong Regionally restricted euxassay_001964_07

Specimen euxassay_001964_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_08
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_001964_08 facial motor nucleus
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_08
TS23: ventral grey horn Moderate Regionally restricted euxassay_001964_08
TS23: stomach Strong Regionally restricted euxassay_001964_08

Specimen euxassay_001964_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_09
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_09
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_09

Specimen euxassay_001964_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_10
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_001964_10
TS23: trachea Moderate Regionally restricted euxassay_001964_10

Specimen euxassay_001964_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: left lung Strong Regionally restricted euxassay_001964_11
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001964_11
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_001964_11
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_11
TS23: ventral grey horn Moderate Regionally restricted euxassay_001964_11
TS23: thoracic ganglion Moderate Regionally restricted euxassay_001964_11
TS23: trachea Moderate Regionally restricted euxassay_001964_11

Specimen euxassay_001964_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_12
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001964_12
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_001964_12
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_001964_12

Specimen euxassay_001964_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_13
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_001964_13
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001964_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_13
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_001964_13

Specimen euxassay_001964_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_14
TS23: hypothalamus ventricular layer Weak Regionally restricted euxassay_001964_14
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_001964_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_001964_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_001964_14
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_14
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_001964_14 facial motor nucleus
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_14

Specimen euxassay_001964_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_15
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_15
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_15
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_001964_15 facial motor nucleus
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_15
TS23: cervical ganglion Moderate Regionally restricted euxassay_001964_15

Specimen euxassay_001964_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001964_16
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_16
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_16
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_001964_16

Specimen euxassay_001964_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001964_17
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_17
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_001964_17 trigeminal motor nucleus

Specimen euxassay_001964_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_18
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_18
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_18
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_001964_18 trigeminal motor nucleus

Specimen euxassay_001964_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_19
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_001964_19
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_19
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_19

Specimen euxassay_001964_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001964_20
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_001964_20
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_001964_20

Specimen euxassay_001964_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: right lung Strong Regionally restricted euxassay_001964_21
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001964_21

Specimen euxassay_001964_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_001964_22


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory