About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826197
Gene symbol: Mical3
Gene name: microtubule associated monooxygenase, calponin and LIM domain containing 3
Probe: IMAGE clone 1382292
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_001874_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_01

Specimen euxassay_001874_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_02
TS23: hindbrain Moderate Uniform euxassay_001874_02
TS23: neural retina Moderate Regionally restricted euxassay_001874_02

Specimen euxassay_001874_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_03
TS23: hindbrain Moderate Uniform euxassay_001874_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_03
TS23: facial ganglion Moderate Regionally restricted euxassay_001874_03
TS23: neural retina Moderate Regionally restricted euxassay_001874_03

Specimen euxassay_001874_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_04
TS23: hindbrain Moderate Uniform euxassay_001874_04
TS23: midbrain Moderate Uniform euxassay_001874_04
TS23: facial ganglion Moderate Regionally restricted euxassay_001874_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_04
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_04
TS23: neural retina Moderate Regionally restricted euxassay_001874_04

Specimen euxassay_001874_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Strong Regionally restricted euxassay_001874_05
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001874_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_05
TS23: hindbrain Moderate Uniform euxassay_001874_05
TS23: midbrain Moderate Uniform euxassay_001874_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001874_05
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001874_05
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_05

Specimen euxassay_001874_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_001874_06
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001874_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_06
TS23: midbrain Moderate Uniform euxassay_001874_06
TS23: hindbrain Moderate Uniform euxassay_001874_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001874_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001874_06
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_06

Specimen euxassay_001874_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_001874_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001874_07
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001874_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_07
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001874_07
TS23: midbrain Moderate Uniform euxassay_001874_07
TS23: hindbrain Moderate Uniform euxassay_001874_07
TS23: spinal cord Moderate Uniform euxassay_001874_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_07
TS23: vagus ganglion Moderate Regionally restricted euxassay_001874_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001874_07
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_07
TS23: interdigital region between hindlimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_001874_07
TS23: interdigital region between hindlimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_001874_07
TS23: interdigital region between hindlimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_001874_07
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_001874_07
TS23: nucleus pulposus Moderate Regionally restricted euxassay_001874_07

Specimen euxassay_001874_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_001874_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001874_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_08
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_08
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001874_08
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001874_08
TS23: spinal cord Moderate Uniform euxassay_001874_08
TS23: midbrain Moderate Uniform euxassay_001874_08
TS23: hindbrain Moderate Uniform euxassay_001874_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001874_08
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_08
TS23: interdigital region between hindlimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_001874_08
TS23: interdigital region between hindlimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_001874_08
TS23: interdigital region between hindlimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_001874_08
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_001874_08

Specimen euxassay_001874_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001874_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_09
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001874_09
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001874_09
TS23: spinal cord Moderate Uniform euxassay_001874_09
TS23: midbrain Moderate Uniform euxassay_001874_09
TS23: hindbrain Moderate Uniform euxassay_001874_09
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_09
TS23: interdigital region between hindlimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_001874_09
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_001874_09
TS23: interdigital region between hindlimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_001874_09

Specimen euxassay_001874_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001874_10
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001874_10
TS23: spinal cord Moderate Uniform euxassay_001874_10
TS23: midbrain Moderate Uniform euxassay_001874_10
TS23: hindbrain Moderate Uniform euxassay_001874_10
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_10

Specimen euxassay_001874_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001874_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_11
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_11
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001874_11
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001874_11
TS23: spinal cord Moderate Uniform euxassay_001874_11
TS23: midbrain Moderate Uniform euxassay_001874_11
TS23: hindbrain Moderate Uniform euxassay_001874_11
TS23: bladder Moderate Regionally restricted euxassay_001874_11

Specimen euxassay_001874_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001874_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_12
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001874_12
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001874_12
TS23: spinal cord Moderate Uniform euxassay_001874_12
TS23: midbrain Moderate Uniform euxassay_001874_12
TS23: hindbrain Moderate Uniform euxassay_001874_12
TS23: bladder Moderate Regionally restricted euxassay_001874_12

Specimen euxassay_001874_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001874_13
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_13
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001874_13
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001874_13
TS23: spinal cord Moderate Uniform euxassay_001874_13
TS23: midbrain Moderate Uniform euxassay_001874_13
TS23: hindbrain Moderate Uniform euxassay_001874_13
TS23: bladder Moderate Regionally restricted euxassay_001874_13

Specimen euxassay_001874_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001874_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_14
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_14
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001874_14
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001874_14
TS23: midbrain Moderate Uniform euxassay_001874_14
TS23: hindbrain Moderate Uniform euxassay_001874_14

Specimen euxassay_001874_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_001874_15
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001874_15
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001874_15
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001874_15
TS23: midbrain Moderate Uniform euxassay_001874_15
TS23: hindbrain Moderate Uniform euxassay_001874_15

Specimen euxassay_001874_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_001874_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_16
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_16
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001874_16
TS23: hypothalamus mantle layer Moderate Regionally restricted euxassay_001874_16
TS23: midbrain Moderate Uniform euxassay_001874_16
TS23: hindbrain Moderate Uniform euxassay_001874_16
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_001874_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_16
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001874_16
TS23: rib Moderate Regionally restricted euxassay_001874_16
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_16

Specimen euxassay_001874_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_17
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_001874_17
TS23: hindbrain Moderate Uniform euxassay_001874_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_001874_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_17
TS23: rib Moderate Regionally restricted euxassay_001874_17
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_17

Specimen euxassay_001874_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_18
TS23: hindbrain Moderate Uniform euxassay_001874_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_18
TS23: facial ganglion Moderate Regionally restricted euxassay_001874_18
TS23: rib Moderate Regionally restricted euxassay_001874_18
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_18

Specimen euxassay_001874_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_19
TS23: hindbrain Moderate Uniform euxassay_001874_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_19
TS23: facial ganglion Moderate Regionally restricted euxassay_001874_19
TS23: rib Moderate Regionally restricted euxassay_001874_19
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_19

Specimen euxassay_001874_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_001874_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_001874_20
TS23: rib Moderate Regionally restricted euxassay_001874_20
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_001874_20
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_001874_20
TS23: interdigital region between hindlimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_001874_20
TS23: interdigital region between hindlimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_001874_20
TS23: interdigital region between hindlimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_001874_20

Specimen euxassay_001874_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_001874_21
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_21
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_001874_21
TS23: interdigital region between hindlimb digits 1 and 2 mesenchyme Moderate Regionally restricted euxassay_001874_21
TS23: interdigital region between hindlimb digits 2 and 3 mesenchyme Moderate Regionally restricted euxassay_001874_21
TS23: interdigital region between hindlimb digits 3 and 4 mesenchyme Moderate Regionally restricted euxassay_001874_21
TS23: interdigital region between hindlimb digits 4 and 5 mesenchyme Moderate Regionally restricted euxassay_001874_21

Specimen euxassay_001874_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_001874_22
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_22
TS23: neural retina Moderate Regionally restricted euxassay_001874_22

Specimen euxassay_001874_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_001874_23
TS23: neural retina Moderate Regionally restricted euxassay_001874_23


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/29/2020
MGI 6.15
The Jackson Laboratory