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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825842
Gene symbol: Krt7
Gene name: keratin 7
Probe: MGC clone 40614
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_002600_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002600_01
TS23: epidermis Strong Regionally restricted euxassay_002600_01

Specimen euxassay_002600_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002600_02
TS23: epidermis Strong Regionally restricted euxassay_002600_02
TS23: stomach Strong Regionally restricted euxassay_002600_02

Specimen euxassay_002600_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002600_03
TS23: lung Strong Spotted euxassay_002600_03
TS23: epidermis Strong Regionally restricted euxassay_002600_03
TS23: stomach Strong Regionally restricted euxassay_002600_03

Specimen euxassay_002600_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002600_04
TS23: lung Strong Spotted euxassay_002600_04
TS23: vibrissa Strong Regionally restricted euxassay_002600_04
TS23: epidermis Strong Regionally restricted euxassay_002600_04
TS23: stomach Strong Regionally restricted euxassay_002600_04

Specimen euxassay_002600_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002600_05
TS23: lung Strong Spotted euxassay_002600_05
TS23: vibrissa Strong Regionally restricted euxassay_002600_05
TS23: epidermis Strong Regionally restricted euxassay_002600_05
TS23: stomach Strong Regionally restricted euxassay_002600_05
TS23: midgut Strong Regionally restricted euxassay_002600_05

Specimen euxassay_002600_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_06
TS23: epidermis Strong Regionally restricted euxassay_002600_06
TS23: vibrissa Strong Regionally restricted euxassay_002600_06
TS23: oral epithelium Strong Regionally restricted euxassay_002600_06
TS23: midgut Strong Regionally restricted euxassay_002600_06
TS23: stomach Strong Regionally restricted euxassay_002600_06

Specimen euxassay_002600_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_07
TS23: vibrissa Strong Regionally restricted euxassay_002600_07
TS23: epidermis Strong Regionally restricted euxassay_002600_07
TS23: upper jaw molar Strong Regionally restricted euxassay_002600_07
TS23: oral epithelium Strong Regionally restricted euxassay_002600_07
TS23: midgut Strong Regionally restricted euxassay_002600_07
TS23: stomach Strong Regionally restricted euxassay_002600_07
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002600_07

Specimen euxassay_002600_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_08
TS23: epidermis Strong Regionally restricted euxassay_002600_08
TS23: vibrissa Strong Regionally restricted euxassay_002600_08
TS23: oral epithelium Strong Regionally restricted euxassay_002600_08
TS23: lower jaw molar Strong Regionally restricted euxassay_002600_08
TS23: hindgut Strong Regionally restricted euxassay_002600_08
TS23: stomach Strong Regionally restricted euxassay_002600_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002600_08
TS23: renal calyx Strong Regionally restricted euxassay_002600_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_002600_08

Specimen euxassay_002600_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_09
TS23: epidermis Strong Regionally restricted euxassay_002600_09
TS23: oral epithelium Strong Regionally restricted euxassay_002600_09
TS23: midgut Strong Regionally restricted euxassay_002600_09
TS23: stomach Strong Regionally restricted euxassay_002600_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002600_09
TS23: renal calyx Strong Regionally restricted euxassay_002600_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_002600_09

Specimen euxassay_002600_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_10
TS23: epidermis Strong Regionally restricted euxassay_002600_10
TS23: lower jaw incisor Strong Regionally restricted euxassay_002600_10
TS23: oral epithelium Strong Regionally restricted euxassay_002600_10
TS23: midgut Moderate Regionally restricted euxassay_002600_10
TS23: stomach Moderate Regionally restricted euxassay_002600_10
TS23: renal calyx Strong Regionally restricted euxassay_002600_10
TS23: olfactory epithelium Moderate Regionally restricted euxassay_002600_10
TS23: naris Strong Regionally restricted euxassay_002600_10

Specimen euxassay_002600_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_11
TS23: epidermis Strong Regionally restricted euxassay_002600_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_002600_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_002600_11
TS23: oral epithelium Strong Regionally restricted euxassay_002600_11
TS23: midgut Moderate Regionally restricted euxassay_002600_11
TS23: hindgut Moderate Regionally restricted euxassay_002600_11
TS23: thymus primordium Moderate Uniform euxassay_002600_11
TS23: naris Strong Regionally restricted euxassay_002600_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_002600_11

Specimen euxassay_002600_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_12
TS23: epidermis Strong Regionally restricted euxassay_002600_12
TS23: oral epithelium Strong Regionally restricted euxassay_002600_12
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_002600_12
TS23: hindgut Moderate Regionally restricted euxassay_002600_12
TS23: midgut Moderate Regionally restricted euxassay_002600_12
TS23: thymus primordium Moderate Uniform euxassay_002600_12
TS23: bladder Strong Regionally restricted euxassay_002600_12
TS23: urethra Strong Regionally restricted euxassay_002600_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: esophagus Strong Regionally restricted euxassay_002600_12
TS23: trachea Strong Regionally restricted euxassay_002600_12
TS23: naris Strong Regionally restricted euxassay_002600_12

Specimen euxassay_002600_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_13
TS23: epidermis Strong Regionally restricted euxassay_002600_13
TS23: lower jaw incisor Strong Regionally restricted euxassay_002600_13
TS23: oral epithelium Strong Regionally restricted euxassay_002600_13
TS23: midgut Moderate Regionally restricted euxassay_002600_13
TS23: hindgut Moderate Regionally restricted euxassay_002600_13
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_002600_13
TS23: rectum Strong Regionally restricted euxassay_002600_13
TS23: thymus primordium Weak Uniform euxassay_002600_13
TS23: bladder Strong Regionally restricted euxassay_002600_13
TS23: urethra Strong Regionally restricted euxassay_002600_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: esophagus Strong Regionally restricted euxassay_002600_13
TS23: trachea Strong Regionally restricted euxassay_002600_13
TS23: nucleus pulposus Strong Regionally restricted euxassay_002600_13
TS23: naris Strong Regionally restricted euxassay_002600_13

Specimen euxassay_002600_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_14
TS23: epidermis Strong Regionally restricted euxassay_002600_14
TS23: upper jaw incisor Strong Regionally restricted euxassay_002600_14
TS23: lower jaw incisor Strong Regionally restricted euxassay_002600_14
TS23: oral epithelium Strong Regionally restricted euxassay_002600_14
TS23: midgut Moderate Regionally restricted euxassay_002600_14
TS23: hindgut Moderate Regionally restricted euxassay_002600_14
TS23: foregut-midgut junction Moderate Regionally restricted euxassay_002600_14
TS23: thymus primordium Moderate Uniform euxassay_002600_14
TS23: bladder Strong Regionally restricted euxassay_002600_14
TS23: urethra Strong Regionally restricted euxassay_002600_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: trachea Strong Regionally restricted euxassay_002600_14
TS23: naris Strong Regionally restricted euxassay_002600_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_002600_14

Specimen euxassay_002600_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_15
TS23: epidermis Strong Regionally restricted euxassay_002600_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_002600_15
TS23: upper jaw incisor Strong Regionally restricted euxassay_002600_15
TS23: oral epithelium Strong Regionally restricted euxassay_002600_15
TS23: hindgut Moderate Regionally restricted euxassay_002600_15
TS23: midgut Moderate Regionally restricted euxassay_002600_15
TS23: thymus primordium Moderate Uniform euxassay_002600_15
TS23: trachea Strong Regionally restricted euxassay_002600_15
TS23: naris Strong Regionally restricted euxassay_002600_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_002600_15

Specimen euxassay_002600_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_16
TS23: epidermis Strong Regionally restricted euxassay_002600_16
TS23: lower jaw incisor Strong Regionally restricted euxassay_002600_16
TS23: oral epithelium Strong Regionally restricted euxassay_002600_16
TS23: midgut Moderate Regionally restricted euxassay_002600_16
TS23: hindgut Moderate Regionally restricted euxassay_002600_16
TS23: naris Strong Regionally restricted euxassay_002600_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_002600_16

Specimen euxassay_002600_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_17
TS23: epidermis Strong Regionally restricted euxassay_002600_17
TS23: oral epithelium Strong Regionally restricted euxassay_002600_17
TS23: midgut Moderate Regionally restricted euxassay_002600_17
TS23: hindgut Moderate Regionally restricted euxassay_002600_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002600_17
TS23: renal calyx Strong Regionally restricted euxassay_002600_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_002600_17

Specimen euxassay_002600_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_18
TS23: epidermis Strong Regionally restricted euxassay_002600_18
TS23: oral epithelium Strong Regionally restricted euxassay_002600_18
TS23: lower jaw molar Strong Regionally restricted euxassay_002600_18
TS23: upper jaw molar Strong Regionally restricted euxassay_002600_18
TS23: hindgut Moderate Regionally restricted euxassay_002600_18
TS23: midgut Moderate Regionally restricted euxassay_002600_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002600_18
TS23: renal calyx Strong Regionally restricted euxassay_002600_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_002600_18

Specimen euxassay_002600_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_19
TS23: epidermis Strong Regionally restricted euxassay_002600_19
TS23: oral epithelium Strong Regionally restricted euxassay_002600_19
TS23: midgut Moderate Regionally restricted euxassay_002600_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_002600_19
TS23: renal calyx Strong Regionally restricted euxassay_002600_19

Specimen euxassay_002600_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Strong Spotted euxassay_002600_20
TS23: epidermis Strong Regionally restricted euxassay_002600_20
TS23: oral epithelium Strong Regionally restricted euxassay_002600_20

Specimen euxassay_002600_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002600_21
TS23: lung Strong Spotted euxassay_002600_21
TS23: epidermis Strong Regionally restricted euxassay_002600_21

Specimen euxassay_002600_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002600_22
TS23: lung Strong Spotted euxassay_002600_22
TS23: epidermis Strong Regionally restricted euxassay_002600_22

Specimen euxassay_002600_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_002600_23
TS23: lung Strong Spotted euxassay_002600_23
TS23: epidermis Strong Regionally restricted euxassay_002600_23


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/19/2021
MGI 6.17
The Jackson Laboratory