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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825683
Gene symbol: Jph4
Gene name: junctophilin 4
Probe: MGC clone 64629
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007469_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_01

Specimen euxassay_007469_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_02
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_02

Specimen euxassay_007469_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_03
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_03
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_007469_03

Specimen euxassay_007469_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_04
TS23: facial ganglion Strong Regionally restricted euxassay_007469_04
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_04
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_007469_04

Specimen euxassay_007469_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_05
TS23: facial ganglion Strong Regionally restricted euxassay_007469_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_05
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_05
TS23: midbrain Strong Regionally restricted euxassay_007469_05
TS23: hindbrain Strong Regionally restricted euxassay_007469_05
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_007469_05

Specimen euxassay_007469_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_06
TS23: facial ganglion Strong Regionally restricted euxassay_007469_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_06
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_06
TS23: hindbrain Moderate Regionally restricted euxassay_007469_06
TS23: midbrain Moderate Regionally restricted euxassay_007469_06

Specimen euxassay_007469_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_07
TS23: facial ganglion Strong Regionally restricted euxassay_007469_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007469_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_07
TS23: diencephalon Moderate Regionally restricted euxassay_007469_07
TS23: midbrain Moderate Regionally restricted euxassay_007469_07
TS23: hindbrain Moderate Regionally restricted euxassay_007469_07

Specimen euxassay_007469_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007469_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_08
TS23: midbrain Moderate Regionally restricted euxassay_007469_08
TS23: hindbrain Moderate Regionally restricted euxassay_007469_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_08
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_08
TS23: telencephalon Moderate Regionally restricted euxassay_007469_08
TS23: spinal cord Moderate Regionally restricted euxassay_007469_08
TS23: foot mesenchyme Moderate Regionally restricted euxassay_007469_08

Specimen euxassay_007469_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_09
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_09
TS23: vagus ganglion Strong Regionally restricted euxassay_007469_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_09
TS23: spinal cord Moderate Regionally restricted euxassay_007469_09
TS23: midbrain Moderate Regionally restricted euxassay_007469_09
TS23: hindbrain Moderate Regionally restricted euxassay_007469_09
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007469_09
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_09
TS23: diencephalon Moderate Regionally restricted euxassay_007469_09

Specimen euxassay_007469_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007469_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_10
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_10
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_10
TS23: midbrain Moderate Regionally restricted euxassay_007469_10
TS23: hindbrain Moderate Regionally restricted euxassay_007469_10
TS23: spinal cord Moderate Regionally restricted euxassay_007469_10
TS23: diencephalon Moderate Regionally restricted euxassay_007469_10
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_007469_10
TS23: cervical ganglion Weak Regionally restricted euxassay_007469_10

Specimen euxassay_007469_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Regionally restricted euxassay_007469_11
TS23: midbrain Moderate Regionally restricted euxassay_007469_11
TS23: hindbrain Moderate Regionally restricted euxassay_007469_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_11
TS23: diencephalon Moderate Regionally restricted euxassay_007469_11
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_11
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_11
TS23: thoracic ganglion Weak Regionally restricted euxassay_007469_11

Specimen euxassay_007469_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Regionally restricted euxassay_007469_12
TS23: midbrain Moderate Regionally restricted euxassay_007469_12
TS23: hindbrain Moderate Regionally restricted euxassay_007469_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_12
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007469_12
TS23: diencephalon Moderate Regionally restricted euxassay_007469_12
TS23: thoracic ganglion Weak Regionally restricted euxassay_007469_12

Specimen euxassay_007469_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_13
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_13
TS23: diencephalon Moderate Regionally restricted euxassay_007469_13
TS23: hindbrain Moderate Regionally restricted euxassay_007469_13
TS23: midbrain Moderate Regionally restricted euxassay_007469_13
TS23: spinal cord Moderate Regionally restricted euxassay_007469_13

Specimen euxassay_007469_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_14
TS23: spinal cord Moderate Regionally restricted euxassay_007469_14
TS23: midbrain Moderate Regionally restricted euxassay_007469_14
TS23: hindbrain Moderate Regionally restricted euxassay_007469_14
TS23: diencephalon Moderate Regionally restricted euxassay_007469_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_14
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_14
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_14

Specimen euxassay_007469_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_15
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_15
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_15
TS23: diencephalon Moderate Regionally restricted euxassay_007469_15
TS23: midbrain Moderate Regionally restricted euxassay_007469_15
TS23: hindbrain Moderate Regionally restricted euxassay_007469_15
TS23: spinal cord Moderate Regionally restricted euxassay_007469_15

Specimen euxassay_007469_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_16
TS23: diencephalon Moderate Regionally restricted euxassay_007469_16
TS23: hindbrain Moderate Regionally restricted euxassay_007469_16
TS23: midbrain Moderate Regionally restricted euxassay_007469_16
TS23: spinal cord Moderate Regionally restricted euxassay_007469_16
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_16
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_16

Specimen euxassay_007469_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007469_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_17
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_17
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_17
TS23: diencephalon Moderate Regionally restricted euxassay_007469_17
TS23: hindbrain Moderate Regionally restricted euxassay_007469_17
TS23: midbrain Moderate Regionally restricted euxassay_007469_17
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_007469_17

Specimen euxassay_007469_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_18
TS23: vagus ganglion Strong Regionally restricted euxassay_007469_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_18
TS23: midbrain Moderate Regionally restricted euxassay_007469_18
TS23: hindbrain Moderate Regionally restricted euxassay_007469_18
TS23: diencephalon Moderate Regionally restricted euxassay_007469_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_18
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_18
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_18
TS23: cervical ganglion Weak Regionally restricted euxassay_007469_18

Specimen euxassay_007469_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007469_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_19
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_19
TS23: hindbrain Moderate Regionally restricted euxassay_007469_19
TS23: midbrain Moderate Regionally restricted euxassay_007469_19

Specimen euxassay_007469_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007469_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_20
TS23: facial ganglion Strong Regionally restricted euxassay_007469_20
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_20
TS23: midbrain Moderate Regionally restricted euxassay_007469_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_20

Specimen euxassay_007469_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_21
TS23: facial ganglion Strong Regionally restricted euxassay_007469_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_21
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_21
TS23: hindbrain Moderate Regionally restricted euxassay_007469_21
TS23: foot mesenchyme Moderate Regionally restricted euxassay_007469_21

Specimen euxassay_007469_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_22
TS23: facial ganglion Strong Regionally restricted euxassay_007469_22
TS23: hindbrain Moderate Regionally restricted euxassay_007469_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_22
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_22
TS23: foot mesenchyme Moderate Regionally restricted euxassay_007469_22

Specimen euxassay_007469_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_23
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_23
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_23

Specimen euxassay_007469_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_24
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_24


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/30/2021
MGI 6.17
The Jackson Laboratory