About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825683
Gene symbol: Jph4
Gene name: junctophilin 4
Probe: MGC clone 64629
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007469_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_01

Specimen euxassay_007469_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_02
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_02

Specimen euxassay_007469_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_03
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_03
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_007469_03

Specimen euxassay_007469_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_04
TS23: facial ganglion Strong Regionally restricted euxassay_007469_04
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_04
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_007469_04

Specimen euxassay_007469_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_05
TS23: facial ganglion Strong Regionally restricted euxassay_007469_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_05
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_05
TS23: midbrain Strong Regionally restricted euxassay_007469_05
TS23: hindbrain Strong Regionally restricted euxassay_007469_05
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_007469_05

Specimen euxassay_007469_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_06
TS23: facial ganglion Strong Regionally restricted euxassay_007469_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_06
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_06
TS23: hindbrain Moderate Regionally restricted euxassay_007469_06
TS23: midbrain Moderate Regionally restricted euxassay_007469_06

Specimen euxassay_007469_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_07
TS23: facial ganglion Strong Regionally restricted euxassay_007469_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007469_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_07
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_07
TS23: diencephalon Moderate Regionally restricted euxassay_007469_07
TS23: midbrain Moderate Regionally restricted euxassay_007469_07
TS23: hindbrain Moderate Regionally restricted euxassay_007469_07

Specimen euxassay_007469_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_08
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007469_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_08
TS23: midbrain Moderate Regionally restricted euxassay_007469_08
TS23: hindbrain Moderate Regionally restricted euxassay_007469_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_08
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_08
TS23: telencephalon Moderate Regionally restricted euxassay_007469_08
TS23: spinal cord Moderate Regionally restricted euxassay_007469_08
TS23: foot mesenchyme Moderate Regionally restricted euxassay_007469_08

Specimen euxassay_007469_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_09
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_09
TS23: vagus ganglion Strong Regionally restricted euxassay_007469_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_09
TS23: spinal cord Moderate Regionally restricted euxassay_007469_09
TS23: midbrain Moderate Regionally restricted euxassay_007469_09
TS23: hindbrain Moderate Regionally restricted euxassay_007469_09
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007469_09
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_09
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_09
TS23: diencephalon Moderate Regionally restricted euxassay_007469_09

Specimen euxassay_007469_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007469_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_10
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_10
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_10
TS23: midbrain Moderate Regionally restricted euxassay_007469_10
TS23: hindbrain Moderate Regionally restricted euxassay_007469_10
TS23: spinal cord Moderate Regionally restricted euxassay_007469_10
TS23: diencephalon Moderate Regionally restricted euxassay_007469_10
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_007469_10
TS23: cervical ganglion Weak Regionally restricted euxassay_007469_10

Specimen euxassay_007469_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Regionally restricted euxassay_007469_11
TS23: midbrain Moderate Regionally restricted euxassay_007469_11
TS23: hindbrain Moderate Regionally restricted euxassay_007469_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_11
TS23: diencephalon Moderate Regionally restricted euxassay_007469_11
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_11
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_11
TS23: thoracic ganglion Weak Regionally restricted euxassay_007469_11

Specimen euxassay_007469_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spinal cord Moderate Regionally restricted euxassay_007469_12
TS23: midbrain Moderate Regionally restricted euxassay_007469_12
TS23: hindbrain Moderate Regionally restricted euxassay_007469_12
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_12
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_12
TS23: olfactory cortex marginal layer Moderate Regionally restricted euxassay_007469_12
TS23: diencephalon Moderate Regionally restricted euxassay_007469_12
TS23: thoracic ganglion Weak Regionally restricted euxassay_007469_12

Specimen euxassay_007469_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_13
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_13
TS23: diencephalon Moderate Regionally restricted euxassay_007469_13
TS23: hindbrain Moderate Regionally restricted euxassay_007469_13
TS23: midbrain Moderate Regionally restricted euxassay_007469_13
TS23: spinal cord Moderate Regionally restricted euxassay_007469_13

Specimen euxassay_007469_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_14
TS23: spinal cord Moderate Regionally restricted euxassay_007469_14
TS23: midbrain Moderate Regionally restricted euxassay_007469_14
TS23: hindbrain Moderate Regionally restricted euxassay_007469_14
TS23: diencephalon Moderate Regionally restricted euxassay_007469_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_14
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_14
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_14

Specimen euxassay_007469_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_15
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_15
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_15
TS23: diencephalon Moderate Regionally restricted euxassay_007469_15
TS23: midbrain Moderate Regionally restricted euxassay_007469_15
TS23: hindbrain Moderate Regionally restricted euxassay_007469_15
TS23: spinal cord Moderate Regionally restricted euxassay_007469_15

Specimen euxassay_007469_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_16
TS23: diencephalon Moderate Regionally restricted euxassay_007469_16
TS23: hindbrain Moderate Regionally restricted euxassay_007469_16
TS23: midbrain Moderate Regionally restricted euxassay_007469_16
TS23: spinal cord Moderate Regionally restricted euxassay_007469_16
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_16
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_16

Specimen euxassay_007469_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007469_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_17
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_17
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_17
TS23: diencephalon Moderate Regionally restricted euxassay_007469_17
TS23: hindbrain Moderate Regionally restricted euxassay_007469_17
TS23: midbrain Moderate Regionally restricted euxassay_007469_17
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_007469_17

Specimen euxassay_007469_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_18
TS23: vagus ganglion Strong Regionally restricted euxassay_007469_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_18
TS23: midbrain Moderate Regionally restricted euxassay_007469_18
TS23: hindbrain Moderate Regionally restricted euxassay_007469_18
TS23: diencephalon Moderate Regionally restricted euxassay_007469_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_18
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_18
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_007469_18
TS23: cervical ganglion Weak Regionally restricted euxassay_007469_18

Specimen euxassay_007469_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007469_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_007469_19
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_19
TS23: hindbrain Moderate Regionally restricted euxassay_007469_19
TS23: midbrain Moderate Regionally restricted euxassay_007469_19

Specimen euxassay_007469_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_007469_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_20
TS23: facial ganglion Strong Regionally restricted euxassay_007469_20
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_007469_20
TS23: midbrain Moderate Regionally restricted euxassay_007469_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_007469_20
TS23: telencephalon marginal layer Moderate Regionally restricted euxassay_007469_20

Specimen euxassay_007469_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_21
TS23: facial ganglion Strong Regionally restricted euxassay_007469_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_21
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_21
TS23: hindbrain Moderate Regionally restricted euxassay_007469_21
TS23: foot mesenchyme Moderate Regionally restricted euxassay_007469_21

Specimen euxassay_007469_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_22
TS23: facial ganglion Strong Regionally restricted euxassay_007469_22
TS23: hindbrain Moderate Regionally restricted euxassay_007469_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_22
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_22
TS23: foot mesenchyme Moderate Regionally restricted euxassay_007469_22

Specimen euxassay_007469_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_007469_23
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_23
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_23

Specimen euxassay_007469_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_007469_24
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_007469_24


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/19/2024
MGI 6.23
The Jackson Laboratory