About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825638
Gene symbol: Itga11
Gene name: integrin alpha 11
Probe: MGC clone 76390
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008538_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_01
Specimen euxassay_008538_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008538_02
TS23: humerus Moderate Regionally restricted euxassay_008538_02
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_02
Specimen euxassay_008538_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_008538_03
TS23: rib Moderate Regionally restricted euxassay_008538_03
TS23: humerus Moderate Regionally restricted euxassay_008538_03
TS23: scapula Moderate Regionally restricted euxassay_008538_03
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_03
Specimen euxassay_008538_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_008538_04
TS23: rib Moderate Regionally restricted euxassay_008538_04
TS23: humerus Moderate Regionally restricted euxassay_008538_04
TS23: scapula Moderate Regionally restricted euxassay_008538_04
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_008538_04
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_008538_04
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_008538_04
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_04
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_04
Specimen euxassay_008538_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_008538_05
TS23: rib Moderate Regionally restricted euxassay_008538_05
TS23: humerus Moderate Regionally restricted euxassay_008538_05
TS23: scapula Moderate Regionally restricted euxassay_008538_05
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_008538_05
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_008538_05
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_008538_05
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_05
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_05
Specimen euxassay_008538_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_008538_06
TS23: rib Moderate Regionally restricted euxassay_008538_06
TS23: humerus Moderate Regionally restricted euxassay_008538_06
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_008538_06
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_008538_06
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_06
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_06
Specimen euxassay_008538_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_008538_07
TS23: maxilla Moderate Regionally restricted euxassay_008538_07
TS23: rib Moderate Regionally restricted euxassay_008538_07
TS23: femur Weak Regionally restricted euxassay_008538_07
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_008538_07
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_008538_07
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_07
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_07
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_07
Specimen euxassay_008538_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_008538_08
TS23: maxilla Moderate Regionally restricted euxassay_008538_08
TS23: rib Moderate Regionally restricted euxassay_008538_08
TS23: femur Weak Regionally restricted euxassay_008538_08
TS23: clavicle Weak Regionally restricted euxassay_008538_08
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_008538_08
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_08
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_08
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_08
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_08
Specimen euxassay_008538_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_008538_09
TS23: maxilla Weak Regionally restricted euxassay_008538_09
TS23: rib Moderate Regionally restricted euxassay_008538_09
TS23: femur Weak Regionally restricted euxassay_008538_09
TS23: clavicle Weak Regionally restricted euxassay_008538_09
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_008538_09
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_008538_09
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_09
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_09
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_09
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_09
Specimen euxassay_008538_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_008538_10
TS23: maxilla Weak Regionally restricted euxassay_008538_10
TS23: rib Moderate Regionally restricted euxassay_008538_10
TS23: clavicle Moderate Regionally restricted euxassay_008538_10
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_10
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_10
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_10
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_10
Specimen euxassay_008538_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_008538_11
TS23: rib Moderate Regionally restricted euxassay_008538_11
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_008538_11
TS23: clavicle Moderate Regionally restricted euxassay_008538_11
TS23: axial skeleton Strong Regionally restricted euxassay_008538_11
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_008538_11
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_11
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_11
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_11
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_11
Specimen euxassay_008538_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Moderate Regionally restricted euxassay_008538_12
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_008538_12
TS23: thymus primordium Moderate Regionally restricted euxassay_008538_12
TS23: axial skeleton Strong Regionally restricted euxassay_008538_12
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_008538_12
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_12
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_12
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_12
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_12
Specimen euxassay_008538_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Regionally restricted euxassay_008538_13
TS23: axial skeleton Strong Regionally restricted euxassay_008538_13
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_008538_13
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_13
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_13
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_13
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_13
Specimen euxassay_008538_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Regionally restricted euxassay_008538_14
TS23: axial skeleton Strong Regionally restricted euxassay_008538_14
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_008538_14
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_14
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_14
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_14
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_14
Specimen euxassay_008538_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Regionally restricted euxassay_008538_15
TS23: axial skeleton Strong Regionally restricted euxassay_008538_15
TS23: tail paraxial mesenchyme Moderate Regionally restricted euxassay_008538_15
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_15
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_15
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_15
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_15
Specimen euxassay_008538_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_008538_16
TS23: rib Moderate Regionally restricted euxassay_008538_16
TS23: clavicle Moderate Regionally restricted euxassay_008538_16
TS23: axial skeleton Strong Regionally restricted euxassay_008538_16
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_16
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_16
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_16
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_16
Specimen euxassay_008538_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_008538_17
TS23: maxilla Weak Regionally restricted euxassay_008538_17
TS23: rib Moderate Regionally restricted euxassay_008538_17
TS23: clavicle Moderate Regionally restricted euxassay_008538_17
TS23: axial skeleton Moderate Regionally restricted euxassay_008538_17
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_17
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_17
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_17
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_17
Specimen euxassay_008538_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Weak Regionally restricted euxassay_008538_18
TS23: mandible Weak Regionally restricted euxassay_008538_18
TS23: rib Moderate Regionally restricted euxassay_008538_18
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_008538_18
TS23: clavicle Moderate Regionally restricted euxassay_008538_18
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_18
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_18
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_18
TS23: diencephalon meninges Moderate Regionally restricted euxassay_008538_18
Specimen euxassay_008538_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_008538_19
TS23: rib Moderate Regionally restricted euxassay_008538_19
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_008538_19
TS23: clavicle Moderate Regionally restricted euxassay_008538_19
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_19
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_19
TS23: midbrain meninges Moderate Regionally restricted euxassay_008538_19
Specimen euxassay_008538_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_008538_20
TS23: rib Moderate Regionally restricted euxassay_008538_20
TS23: pelvic girdle skeleton Moderate Regionally restricted euxassay_008538_20
TS23: femur Moderate Regionally restricted euxassay_008538_20
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_20
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_20
Specimen euxassay_008538_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_008538_21
TS23: maxilla Moderate Regionally restricted euxassay_008538_21
TS23: rib Moderate Regionally restricted euxassay_008538_21
TS23: humerus Moderate Regionally restricted euxassay_008538_21
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_008538_21
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_008538_21
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_008538_21
TS23: hindlimb digit 5 mesenchyme Moderate Regionally restricted euxassay_008538_21
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_21
TS23: hindbrain meninges Moderate Regionally restricted euxassay_008538_21
Specimen euxassay_008538_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_008538_22
TS23: rib Weak Regionally restricted euxassay_008538_22
TS23: humerus Moderate Regionally restricted euxassay_008538_22
TS23: scapula Moderate Regionally restricted euxassay_008538_22
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_008538_22
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_008538_22
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_008538_22
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_008538_22
TS23: hindlimb digit 5 mesenchyme Moderate Regionally restricted euxassay_008538_22
TS23: telencephalon meninges Moderate Regionally restricted euxassay_008538_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory