About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825284
Gene symbol: Gucy1a1
Gene name: guanylate cyclase 1, soluble, alpha 1
Probe: T30690
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S9 - Gucy1a3: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: liver Present Single cells Expression is present in single cells in which the intercellular distance between stained cells is much larger than the cell diameter of an individual cell. A thumbnail photo of the staining is contained in the table.

Specimen euxassay_012078_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: humerus Strong Regionally restricted euxassay_012078_01
TS23: radius Strong Regionally restricted euxassay_012078_01
TS23: ulna Strong Regionally restricted euxassay_012078_01
TS23: femur Moderate Regionally restricted euxassay_012078_01
TS23: fibula Strong Regionally restricted euxassay_012078_01
TS23: tibia Strong Regionally restricted euxassay_012078_01
TS23: rib Moderate Regionally restricted euxassay_012078_01
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012078_01
TS23: temporal bone Moderate Regionally restricted euxassay_012078_01
TS23: exoccipital bone Moderate Regionally restricted euxassay_012078_01
TS23: stomach Moderate Regionally restricted euxassay_012078_01

Specimen euxassay_012078_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: humerus Strong Regionally restricted euxassay_012078_02
TS23: scapula Moderate Regionally restricted euxassay_012078_02
TS23: radius Strong Regionally restricted euxassay_012078_02
TS23: tibia Strong Regionally restricted euxassay_012078_02
TS23: fibula Strong Regionally restricted euxassay_012078_02
TS23: femur Strong Regionally restricted euxassay_012078_02
TS23: rib Moderate Regionally restricted euxassay_012078_02
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012078_02
TS23: temporal bone Strong Regionally restricted euxassay_012078_02
TS23: exoccipital bone Strong Regionally restricted euxassay_012078_02
TS23: stomach Moderate Regionally restricted euxassay_012078_02

Specimen euxassay_012078_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: humerus Moderate Regionally restricted euxassay_012078_03
TS23: scapula Moderate Regionally restricted euxassay_012078_03
TS23: radius Moderate Regionally restricted euxassay_012078_03
TS23: femur Moderate Regionally restricted euxassay_012078_03
TS23: tibia Moderate Regionally restricted euxassay_012078_03
TS23: rib Weak Regionally restricted euxassay_012078_03
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012078_03
TS23: temporal bone Moderate Regionally restricted euxassay_012078_03
TS23: exoccipital bone Moderate Regionally restricted euxassay_012078_03
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_012078_03
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012078_03
TS23: lung Weak Regionally restricted euxassay_012078_03
TS23: stomach Moderate Regionally restricted euxassay_012078_03

Specimen euxassay_012078_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: humerus Strong Regionally restricted euxassay_012078_04
TS23: scapula Strong Regionally restricted euxassay_012078_04
TS23: femur Moderate Regionally restricted euxassay_012078_04
TS23: tibia Moderate Regionally restricted euxassay_012078_04
TS23: rib Weak Regionally restricted euxassay_012078_04
TS23: exoccipital bone Moderate Regionally restricted euxassay_012078_04
TS23: temporal bone Moderate Regionally restricted euxassay_012078_04
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_012078_04
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012078_04
TS23: lung Weak Regionally restricted euxassay_012078_04
TS23: stomach Moderate Regionally restricted euxassay_012078_04

Specimen euxassay_012078_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: humerus Moderate Regionally restricted euxassay_012078_05
TS23: femur Strong Regionally restricted euxassay_012078_05
TS23: rib Moderate Regionally restricted euxassay_012078_05
TS23: exoccipital bone Moderate Regionally restricted euxassay_012078_05
TS23: temporal bone Moderate Regionally restricted euxassay_012078_05
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_012078_05
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012078_05
TS23: lung Weak Regionally restricted euxassay_012078_05
TS23: stomach Weak Regionally restricted euxassay_012078_05
TS23: testis cortical region Weak Regionally restricted euxassay_012078_05

Specimen euxassay_012078_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: femur Strong Regionally restricted euxassay_012078_06
TS23: rib Moderate Regionally restricted euxassay_012078_06
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012078_06
TS23: temporal bone Moderate Regionally restricted euxassay_012078_06
TS23: exoccipital bone Moderate Regionally restricted euxassay_012078_06
TS23: clavicle Moderate Regionally restricted euxassay_012078_06
TS23: Meckel's cartilage Strong Regionally restricted euxassay_012078_06
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012078_06
TS23: lung Weak Regionally restricted euxassay_012078_06
TS23: stomach Weak Regionally restricted euxassay_012078_06
TS23: testis cortical region Moderate Regionally restricted euxassay_012078_06

Specimen euxassay_012078_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: femur Strong Regionally restricted euxassay_012078_07
TS23: rib Moderate Regionally restricted euxassay_012078_07
TS23: axial skeleton Moderate Regionally restricted euxassay_012078_07
TS23: basioccipital bone Moderate Regionally restricted euxassay_012078_07
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012078_07
TS23: Meckel's cartilage Strong Regionally restricted euxassay_012078_07
TS23: otic capsule Weak Regionally restricted euxassay_012078_07
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012078_07
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012078_07
TS23: lung Weak Regionally restricted euxassay_012078_07
TS23: stomach Weak Regionally restricted euxassay_012078_07
TS23: testis cortical region Moderate Regionally restricted euxassay_012078_07
TS23: metanephros Moderate Regionally restricted euxassay_012078_07

Specimen euxassay_012078_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: femur Moderate Regionally restricted euxassay_012078_08
TS23: axial skeleton Strong Regionally restricted euxassay_012078_08
TS23: rib Moderate Regionally restricted euxassay_012078_08
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012078_08
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_012078_08
TS23: basioccipital bone Moderate Regionally restricted euxassay_012078_08
TS23: clavicle Moderate Regionally restricted euxassay_012078_08
TS23: Meckel's cartilage Strong Regionally restricted euxassay_012078_08
TS23: otic capsule Weak Regionally restricted euxassay_012078_08
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012078_08
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012078_08
TS23: lung Weak Regionally restricted euxassay_012078_08
TS23: stomach Weak Regionally restricted euxassay_012078_08
TS23: testis cortical region Moderate Regionally restricted euxassay_012078_08
TS23: metanephros Moderate Regionally restricted euxassay_012078_08

Specimen euxassay_012078_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_012078_09
TS23: axial skeleton Strong Regionally restricted euxassay_012078_09
TS23: turbinate bone primordium Strong Regionally restricted euxassay_012078_09
TS23: basioccipital bone Strong Regionally restricted euxassay_012078_09
TS23: Meckel's cartilage Strong Regionally restricted euxassay_012078_09
TS23: otic capsule Weak Regionally restricted euxassay_012078_09
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012078_09
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012078_09
TS23: lung Weak Regionally restricted euxassay_012078_09
TS23: stomach Weak Regionally restricted euxassay_012078_09
TS23: metanephros Moderate Regionally restricted euxassay_012078_09

Specimen euxassay_012078_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_012078_10
TS23: axial skeleton Strong Regionally restricted euxassay_012078_10
TS23: basioccipital bone Strong Regionally restricted euxassay_012078_10
TS23: basisphenoid bone Strong Regionally restricted euxassay_012078_10
TS23: turbinate bone primordium Strong Regionally restricted euxassay_012078_10
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_012078_10
TS23: otic capsule Weak Regionally restricted euxassay_012078_10
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012078_10
TS23: lung Weak Regionally restricted euxassay_012078_10
TS23: metanephros Weak Regionally restricted euxassay_012078_10

Specimen euxassay_012078_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_012078_11
TS23: basioccipital bone Strong Regionally restricted euxassay_012078_11
TS23: basisphenoid bone Strong Regionally restricted euxassay_012078_11
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_012078_11
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012078_11
TS23: lung Weak Regionally restricted euxassay_012078_11
TS23: esophagus Weak Regionally restricted euxassay_012078_11

Specimen euxassay_012078_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_012078_12
TS23: basisphenoid bone Moderate Regionally restricted euxassay_012078_12
TS23: basioccipital bone Moderate Regionally restricted euxassay_012078_12
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_012078_12
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012078_12
TS23: lung Weak Regionally restricted euxassay_012078_12
TS23: midgut Weak Regionally restricted euxassay_012078_12
TS23: hindgut Weak Regionally restricted euxassay_012078_12
TS23: esophagus Weak Regionally restricted euxassay_012078_12

Specimen euxassay_012078_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_012078_13
TS23: basioccipital bone Strong Regionally restricted euxassay_012078_13
TS23: basisphenoid bone Strong Regionally restricted euxassay_012078_13
TS23: Meckel's cartilage Strong Regionally restricted euxassay_012078_13
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012078_13
TS23: lung Weak Regionally restricted euxassay_012078_13
TS23: midgut Weak Regionally restricted euxassay_012078_13
TS23: hindgut Weak Regionally restricted euxassay_012078_13
TS23: urethra Moderate Regionally restricted euxassay_012078_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.

Specimen euxassay_012078_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_012078_14
TS23: basisphenoid bone Strong Regionally restricted euxassay_012078_14
TS23: basioccipital bone Strong Regionally restricted euxassay_012078_14
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_012078_14
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012078_14
TS23: lung Weak Regionally restricted euxassay_012078_14
TS23: midgut Weak Regionally restricted euxassay_012078_14
TS23: hindgut Weak Regionally restricted euxassay_012078_14
TS23: urethra Moderate Regionally restricted euxassay_012078_14 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.

Specimen euxassay_012078_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Weak Regionally restricted euxassay_012078_15
TS23: axial skeleton Strong Regionally restricted euxassay_012078_15
TS23: basisphenoid bone Strong Regionally restricted euxassay_012078_15
TS23: basioccipital bone Strong Regionally restricted euxassay_012078_15
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012078_15
TS23: lung Weak Regionally restricted euxassay_012078_15
TS23: hindgut Weak Regionally restricted euxassay_012078_15
TS23: midgut Weak Regionally restricted euxassay_012078_15

Specimen euxassay_012078_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial skeleton Strong Regionally restricted euxassay_012078_16
TS23: rib Weak Regionally restricted euxassay_012078_16
TS23: basioccipital bone Strong Regionally restricted euxassay_012078_16
TS23: Meckel's cartilage Moderate Regionally restricted euxassay_012078_16
TS23: otic capsule Weak Regionally restricted euxassay_012078_16
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_012078_16
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012078_16
TS23: lung Weak Regionally restricted euxassay_012078_16
TS23: midgut Weak Regionally restricted euxassay_012078_16
TS23: metanephros Weak Regionally restricted euxassay_012078_16

Specimen euxassay_012078_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pelvic girdle skeleton Strong Regionally restricted euxassay_012078_17
TS23: rib Strong Regionally restricted euxassay_012078_17
TS23: axial skeleton Strong Regionally restricted euxassay_012078_17
TS23: basioccipital bone Strong Regionally restricted euxassay_012078_17
TS23: clavicle Moderate Regionally restricted euxassay_012078_17
TS23: Meckel's cartilage Strong Regionally restricted euxassay_012078_17
TS23: otic capsule Moderate Regionally restricted euxassay_012078_17
TS23: lung Weak Regionally restricted euxassay_012078_17
TS23: metanephros Moderate Regionally restricted euxassay_012078_17

Specimen euxassay_012078_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_012078_18
TS23: exoccipital bone Strong Regionally restricted euxassay_012078_18
TS23: clavicle Moderate Regionally restricted euxassay_012078_18
TS23: Meckel's cartilage Strong Regionally restricted euxassay_012078_18
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012078_18
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_012078_18
TS23: lung Weak Regionally restricted euxassay_012078_18
TS23: testis cortical region Weak Regionally restricted euxassay_012078_18
TS23: metanephros Moderate Regionally restricted euxassay_012078_18

Specimen euxassay_012078_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: femur Moderate Regionally restricted euxassay_012078_19
TS23: rib Weak Regionally restricted euxassay_012078_19
TS23: exoccipital bone Strong Regionally restricted euxassay_012078_19
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_012078_19
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012078_19
TS23: temporal bone Moderate Regionally restricted euxassay_012078_19
TS23: clavicle Moderate Regionally restricted euxassay_012078_19
TS23: Meckel's cartilage Strong Regionally restricted euxassay_012078_19
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012078_19
TS23: lung Weak Regionally restricted euxassay_012078_19
TS23: testis cortical region Moderate Regionally restricted euxassay_012078_19
TS23: metanephros Moderate Regionally restricted euxassay_012078_19

Specimen euxassay_012078_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: femur Moderate Regionally restricted euxassay_012078_20
TS23: rib Weak Regionally restricted euxassay_012078_20
TS23: turbinate bone primordium Moderate Regionally restricted euxassay_012078_20
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012078_20
TS23: temporal bone Moderate Regionally restricted euxassay_012078_20
TS23: exoccipital bone Moderate Regionally restricted euxassay_012078_20
TS23: clavicle Moderate Regionally restricted euxassay_012078_20
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012078_20
TS23: lung Weak Regionally restricted euxassay_012078_20
TS23: testis cortical region Moderate Regionally restricted euxassay_012078_20
TS23: metanephros Weak Regionally restricted euxassay_012078_20

Specimen euxassay_012078_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: humerus Strong Regionally restricted euxassay_012078_21
TS23: scapula Strong Regionally restricted euxassay_012078_21
TS23: femur Strong Regionally restricted euxassay_012078_21
TS23: rib Moderate Regionally restricted euxassay_012078_21
TS23: temporal bone Moderate Regionally restricted euxassay_012078_21
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012078_21
TS23: exoccipital bone Moderate Regionally restricted euxassay_012078_21
TS23: Meckel's cartilage Strong Regionally restricted euxassay_012078_21
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012078_21
TS23: lung Weak Regionally restricted euxassay_012078_21
TS23: testis cortical region Moderate Regionally restricted euxassay_012078_21

Specimen euxassay_012078_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: humerus Strong Regionally restricted euxassay_012078_22
TS23: scapula Strong Regionally restricted euxassay_012078_22
TS23: femur Moderate Regionally restricted euxassay_012078_22
TS23: rib Moderate Regionally restricted euxassay_012078_22
TS23: temporal bone Strong Regionally restricted euxassay_012078_22
TS23: Meckel's cartilage Strong Regionally restricted euxassay_012078_22
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_012078_22
TS23: lung Weak Regionally restricted euxassay_012078_22

Specimen euxassay_012078_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: humerus Strong Regionally restricted euxassay_012078_23
TS23: scapula Moderate Regionally restricted euxassay_012078_23
TS23: femur Moderate Regionally restricted euxassay_012078_23
TS23: tibia Moderate Regionally restricted euxassay_012078_23
TS23: rib Strong Regionally restricted euxassay_012078_23
TS23: temporal bone Strong Regionally restricted euxassay_012078_23
TS23: orbito-sphenoid Strong Regionally restricted euxassay_012078_23
TS23: lung Moderate Regionally restricted euxassay_012078_23

Specimen euxassay_012078_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: humerus Moderate Regionally restricted euxassay_012078_24
TS23: femur Strong Regionally restricted euxassay_012078_24
TS23: tibia Strong Regionally restricted euxassay_012078_24
TS23: rib Strong Regionally restricted euxassay_012078_24
TS23: orbito-sphenoid Moderate Regionally restricted euxassay_012078_24
TS23: temporal bone Moderate Regionally restricted euxassay_012078_24
TS23: lung Moderate Regionally restricted euxassay_012078_24


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/12/2021
MGI 6.17
The Jackson Laboratory