About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824627
Gene symbol: Esyt1
Gene name: extended synaptotagmin-like protein 1
Probe: T30119
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011456_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011456_03
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_03

Specimen euxassay_011456_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011456_04
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_04

Specimen euxassay_011456_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011456_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_05
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_05
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_05

Specimen euxassay_011456_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_06
TS23: facial ganglion Strong Regionally restricted euxassay_011456_06
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_06
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_06

Specimen euxassay_011456_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_07
TS23: facial ganglion Strong Regionally restricted euxassay_011456_07
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_07
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_07
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_07

Specimen euxassay_011456_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011456_08
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011456_08
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_08
TS23: pons mantle layer Strong Regionally restricted euxassay_011456_08 trigeminal motor nucleus
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_08
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_08
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_08
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_08

Specimen euxassay_011456_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_09
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011456_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_011456_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011456_09
TS23: pons mantle layer Strong Regionally restricted euxassay_011456_09 trigeminal motor nucleus
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_09
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_09
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_09
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_09

Specimen euxassay_011456_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_011456_10
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_10
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011456_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011456_10 facial motor nucleus
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_10
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_10
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_10
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_10

Specimen euxassay_011456_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_011456_11
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_11
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011456_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011456_11 facial motor nucleus
TS23: cervical ganglion Strong Regionally restricted euxassay_011456_11
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_11
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_11
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_11
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_11

Specimen euxassay_011456_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_011456_12
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011456_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011456_12 facial motor nucleus
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_011456_12
TS23: ventral grey horn Moderate Regionally restricted euxassay_011456_12
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_12
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_12
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_12
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_12
TS23: spinal cord meninges Weak Regionally restricted euxassay_011456_12

Specimen euxassay_011456_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011456_13
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_011456_13
TS23: thymus primordium Moderate Regionally restricted euxassay_011456_13
TS23: olfactory epithelium Weak Regionally restricted euxassay_011456_13
TS23: tongue muscle Weak Regionally restricted euxassay_011456_13
TS23: ventral grey horn Strong Regionally restricted euxassay_011456_13
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_13
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_13
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_13
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_13
TS23: spinal cord meninges Weak Regionally restricted euxassay_011456_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011456_13 dorsal motor nucleus

Specimen euxassay_011456_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thymus primordium Moderate Regionally restricted euxassay_011456_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_011456_14
TS23: vomeronasal organ Weak Regionally restricted euxassay_011456_14
TS23: tongue muscle Weak Regionally restricted euxassay_011456_14
TS23: ventral grey horn Moderate Regionally restricted euxassay_011456_14
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_14
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_14
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_14
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_14
TS23: spinal cord meninges Weak Regionally restricted euxassay_011456_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011456_14 dorsal motor nucleus

Specimen euxassay_011456_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thoracic ganglion Strong Regionally restricted euxassay_011456_15
TS23: thymus primordium Moderate Regionally restricted euxassay_011456_15
TS23: tongue muscle Weak Regionally restricted euxassay_011456_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_011456_15
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_15
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_15
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_15
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_15
TS23: spinal cord meninges Weak Regionally restricted euxassay_011456_15
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_011456_15 dorsal motor nucleus

Specimen euxassay_011456_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thoracic ganglion Strong Regionally restricted euxassay_011456_16
TS23: thymus primordium Moderate Regionally restricted euxassay_011456_16
TS23: tongue muscle Weak Regionally restricted euxassay_011456_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_011456_16
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_16
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_16
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_16
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_16
TS23: spinal cord meninges Weak Regionally restricted euxassay_011456_16

Specimen euxassay_011456_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011456_17
TS23: thymus primordium Moderate Regionally restricted euxassay_011456_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_011456_17
TS23: tongue muscle Weak Regionally restricted euxassay_011456_17
TS23: ventral grey horn Moderate Regionally restricted euxassay_011456_17
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_17
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_17
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_17
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_17
TS23: spinal cord meninges Weak Regionally restricted euxassay_011456_17

Specimen euxassay_011456_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011456_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011456_18 facial motor nucleus
TS23: thymus primordium Moderate Regionally restricted euxassay_011456_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_011456_18
TS23: tongue muscle Weak Regionally restricted euxassay_011456_18
TS23: ventral grey horn Strong Regionally restricted euxassay_011456_18
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_18
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_18
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_18
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_18
TS23: spinal cord meninges Weak Regionally restricted euxassay_011456_18

Specimen euxassay_011456_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal nerve Strong Regionally restricted euxassay_011456_19
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_19
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011456_19
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_011456_19 facial motor nucleus
TS23: cervico-thoracic ganglion Strong Regionally restricted euxassay_011456_19
TS23: cervical ganglion Strong Regionally restricted euxassay_011456_19
TS23: tongue muscle Weak Regionally restricted euxassay_011456_19
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_19
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_19
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_19
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_19
TS23: spinal cord meninges Weak Regionally restricted euxassay_011456_19

Specimen euxassay_011456_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_011456_20
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_20
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011456_20
TS23: pons mantle layer Strong Regionally restricted euxassay_011456_20 trigeminal motor nucleus
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_011456_20
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_20
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_20
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_20
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_20

Specimen euxassay_011456_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_21
TS23: facial ganglion Strong Regionally restricted euxassay_011456_21
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_011456_21
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_011456_21
TS23: dorsal root ganglion Strong Regionally restricted euxassay_011456_21
TS23: diencephalon meninges Weak Regionally restricted euxassay_011456_21
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_21
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_21
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_21

Specimen euxassay_011456_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_22
TS23: facial ganglion Strong Regionally restricted euxassay_011456_22
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_22
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_22
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_22

Specimen euxassay_011456_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_23
TS23: facial ganglion Strong Regionally restricted euxassay_011456_23
TS23: midbrain meninges Weak Regionally restricted euxassay_011456_23
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_23
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_23

Specimen euxassay_011456_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: neural retina Strong Regionally restricted euxassay_011456_24
TS23: trigeminal ganglion Strong Regionally restricted euxassay_011456_24
TS23: facial ganglion Strong Regionally restricted euxassay_011456_24
TS23: hindbrain meninges Weak Regionally restricted euxassay_011456_24
TS23: telencephalon meninges Weak Regionally restricted euxassay_011456_24


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/23/2021
MGI 6.17
The Jackson Laboratory