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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824578
Gene symbol: Epdr1
Gene name: ependymin related protein 1 (zebrafish)
Probe: T31266
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012376_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_01

Specimen euxassay_012376_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_02
TS23: maxilla Moderate Regionally restricted euxassay_012376_02

Specimen euxassay_012376_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_03
TS23: maxilla Moderate Regionally restricted euxassay_012376_03
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_03

Specimen euxassay_012376_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_04
TS23: maxilla Moderate Regionally restricted euxassay_012376_04
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_04

Specimen euxassay_012376_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_05
TS23: maxilla Moderate Regionally restricted euxassay_012376_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_05
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012376_05

Specimen euxassay_012376_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_06
TS23: maxilla Moderate Regionally restricted euxassay_012376_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_06
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012376_06
TS23: facial ganglion Weak Regionally restricted euxassay_012376_06

Specimen euxassay_012376_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_07
TS23: maxilla Moderate Regionally restricted euxassay_012376_07
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012376_07
TS23: facial ganglion Weak Regionally restricted euxassay_012376_07

Specimen euxassay_012376_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_08
TS23: maxilla Moderate Regionally restricted euxassay_012376_08
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_08
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012376_08
TS23: vagus ganglion Weak Regionally restricted euxassay_012376_08
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_012376_08

Specimen euxassay_012376_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_09
TS23: maxilla Moderate Regionally restricted euxassay_012376_09
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012376_09
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012376_09
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012376_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012376_09
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012376_09
TS23: vagus ganglion Weak Regionally restricted euxassay_012376_09

Specimen euxassay_012376_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_10
TS23: maxilla Moderate Regionally restricted euxassay_012376_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012376_10
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012376_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012376_10
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012376_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012376_10
TS23: trigeminal ganglion Weak Regionally restricted euxassay_012376_10

Specimen euxassay_012376_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_11
TS23: maxilla Moderate Regionally restricted euxassay_012376_11
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012376_11
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012376_11
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012376_11
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012376_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012376_11

Specimen euxassay_012376_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012376_12
TS23: maxilla Strong Regionally restricted euxassay_012376_12
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012376_12
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012376_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012376_12
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012376_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012376_12

Specimen euxassay_012376_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_13
TS23: maxilla Moderate Regionally restricted euxassay_012376_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012376_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012376_13
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012376_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012376_13
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012376_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012376_13
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012376_13

Specimen euxassay_012376_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_14
TS23: maxilla Moderate Regionally restricted euxassay_012376_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012376_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012376_14
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012376_14
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012376_14
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012376_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012376_14
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012376_14

Specimen euxassay_012376_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_15
TS23: maxilla Moderate Regionally restricted euxassay_012376_15
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_012376_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012376_15
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012376_15
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012376_15
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012376_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012376_15
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_012376_15

Specimen euxassay_012376_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_16
TS23: maxilla Moderate Regionally restricted euxassay_012376_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012376_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_16
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_012376_16
TS23: metencephalon rest of alar plate Moderate Regionally restricted euxassay_012376_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012376_16

Specimen euxassay_012376_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012376_17
TS23: maxilla Strong Regionally restricted euxassay_012376_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_17
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012376_17
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_012376_17
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_012376_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_012376_17

Specimen euxassay_012376_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_012376_18
TS23: maxilla Strong Regionally restricted euxassay_012376_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_18
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_012376_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012376_18
TS23: vagus ganglion Moderate Regionally restricted euxassay_012376_18

Specimen euxassay_012376_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_19
TS23: maxilla Moderate Regionally restricted euxassay_012376_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012376_19
TS23: vagus ganglion Moderate Regionally restricted euxassay_012376_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_012376_19

Specimen euxassay_012376_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_20
TS23: maxilla Moderate Regionally restricted euxassay_012376_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012376_20

Specimen euxassay_012376_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_21
TS23: maxilla Moderate Regionally restricted euxassay_012376_21
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012376_21
TS23: facial ganglion Moderate Regionally restricted euxassay_012376_21

Specimen euxassay_012376_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_22
TS23: maxilla Moderate Regionally restricted euxassay_012376_22
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_012376_22

Specimen euxassay_012376_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_012376_23
TS23: maxilla Moderate Regionally restricted euxassay_012376_23
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_012376_23


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory