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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824184
Gene symbol: Specc1
Gene name: sperm antigen with calponin homology and coiled-coil domains 1
Probe: T38408
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013924_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_013924_01

Specimen euxassay_013924_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver Moderate Regionally restricted euxassay_013924_02

Specimen euxassay_013924_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_03
TS23: liver Moderate Regionally restricted euxassay_013924_03

Specimen euxassay_013924_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_04
TS23: liver Moderate Regionally restricted euxassay_013924_04

Specimen euxassay_013924_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_05
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_05
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_05
TS23: liver Moderate Regionally restricted euxassay_013924_05

Specimen euxassay_013924_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_06
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_06
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_06
TS23: liver Moderate Regionally restricted euxassay_013924_06

Specimen euxassay_013924_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_07
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_07
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_07
TS23: liver Moderate Regionally restricted euxassay_013924_07
TS23: lower jaw molar Strong Regionally restricted euxassay_013924_07
TS23: upper jaw molar Strong Regionally restricted euxassay_013924_07

Specimen euxassay_013924_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_08
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_08
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_08
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_08
TS23: liver Moderate Regionally restricted euxassay_013924_08
TS23: upper jaw molar Strong Regionally restricted euxassay_013924_08
TS23: lower jaw molar Strong Regionally restricted euxassay_013924_08

Specimen euxassay_013924_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_09
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_09
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_09
TS23: liver Moderate Regionally restricted euxassay_013924_09

Specimen euxassay_013924_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_013924_10
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_10
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_10
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_10
TS23: liver Moderate Regionally restricted euxassay_013924_10

Specimen euxassay_013924_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_013924_11
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_11
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_11
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_11
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_11
TS23: liver Moderate Regionally restricted euxassay_013924_11
TS23: aorta Strong Regionally restricted euxassay_013924_11

Specimen euxassay_013924_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_013924_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_013924_12
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_12
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_013924_12
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_12
TS23: liver Moderate Regionally restricted euxassay_013924_12
TS23: aorta Strong Regionally restricted euxassay_013924_12

Specimen euxassay_013924_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_013924_13
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_013924_13
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_13
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_013924_13
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_13
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_013924_13
TS23: liver Moderate Regionally restricted euxassay_013924_13
TS23: aorta Strong Regionally restricted euxassay_013924_13

Specimen euxassay_013924_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_013924_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_013924_14
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_14
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_013924_14
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_14
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_013924_14
TS23: liver Moderate Regionally restricted euxassay_013924_14
TS23: aorta Strong Regionally restricted euxassay_013924_14

Specimen euxassay_013924_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_013924_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_013924_15
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_15
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_013924_15
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_15
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_15
TS23: liver Moderate Regionally restricted euxassay_013924_15
TS23: aorta Strong Regionally restricted euxassay_013924_15

Specimen euxassay_013924_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_013924_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_16
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_16
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_16
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_16
TS23: liver Moderate Regionally restricted euxassay_013924_16
TS23: aorta Strong Regionally restricted euxassay_013924_16

Specimen euxassay_013924_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_013924_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_17
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_17
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_17
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_17
TS23: liver Moderate Regionally restricted euxassay_013924_17

Specimen euxassay_013924_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_013924_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_18
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_18
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_18
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_18
TS23: liver Moderate Regionally restricted euxassay_013924_18

Specimen euxassay_013924_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_013924_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_19
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_19
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_19
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_19
TS23: liver Moderate Regionally restricted euxassay_013924_19
TS23: upper jaw molar Strong Regionally restricted euxassay_013924_19
TS23: lower jaw molar Strong Regionally restricted euxassay_013924_19

Specimen euxassay_013924_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_20
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_20
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_20
TS23: medulla oblongata alar plate ventricular layer Moderate Regionally restricted euxassay_013924_20
TS23: liver Moderate Regionally restricted euxassay_013924_20

Specimen euxassay_013924_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_21
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_21
TS23: pons ventricular layer Moderate Regionally restricted euxassay_013924_21
TS23: liver Moderate Regionally restricted euxassay_013924_21

Specimen euxassay_013924_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_22
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_22
TS23: liver Moderate Regionally restricted euxassay_013924_22

Specimen euxassay_013924_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_23
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_013924_23
TS23: liver Moderate Regionally restricted euxassay_013924_23

Specimen euxassay_013924_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_013924_24
TS23: liver Moderate Regionally restricted euxassay_013924_24


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory