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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823887
Gene symbol: Ckap5
Gene name: cytoskeleton associated protein 5
Probe: T35662
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_011048_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_01

Specimen euxassay_011048_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_02

Specimen euxassay_011048_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_03
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011048_03

Specimen euxassay_011048_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_04
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011048_04
TS23: facial ganglion Weak Regionally restricted euxassay_011048_04

Specimen euxassay_011048_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_05
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011048_05
TS23: lung Weak Regionally restricted euxassay_011048_05

Specimen euxassay_011048_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_06
TS23: vibrissa Weak Regionally restricted euxassay_011048_06
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011048_06
TS23: lung Weak Regionally restricted euxassay_011048_06

Specimen euxassay_011048_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_07
TS23: vibrissa Weak Regionally restricted euxassay_011048_07
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011048_07
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_011048_07
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_011048_07
TS23: lung Weak Regionally restricted euxassay_011048_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011048_07
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_011048_07
TS23: upper jaw molar Weak Regionally restricted euxassay_011048_07
TS23: lower jaw molar Weak Regionally restricted euxassay_011048_07

Specimen euxassay_011048_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_08
TS23: renal cortex Weak Regionally restricted euxassay_011048_08
TS23: lung Weak Regionally restricted euxassay_011048_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011048_08
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_011048_08
TS23: upper jaw molar Weak Regionally restricted euxassay_011048_08
TS23: lower jaw molar Weak Regionally restricted euxassay_011048_08

Specimen euxassay_011048_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_09
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011048_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_011048_09
TS23: renal cortex Moderate Regionally restricted euxassay_011048_09
TS23: lung Weak Regionally restricted euxassay_011048_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011048_09
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_011048_09
TS23: cervical ganglion Weak Regionally restricted euxassay_011048_09
TS23: upper jaw molar Weak Regionally restricted euxassay_011048_09
TS23: lower jaw molar Weak Regionally restricted euxassay_011048_09

Specimen euxassay_011048_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_10
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_011048_10
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011048_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_011048_10
TS23: renal cortex Moderate Regionally restricted euxassay_011048_10
TS23: lung Weak Regionally restricted euxassay_011048_10
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011048_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_011048_10
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_011048_10

Specimen euxassay_011048_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Moderate Uniform euxassay_011048_11
TS23: telencephalon ventricular layer Moderate Uniform euxassay_011048_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011048_11
TS23: olfactory epithelium Weak Regionally restricted euxassay_011048_11
TS23: renal cortex Weak Regionally restricted euxassay_011048_11
TS23: lung Weak Regionally restricted euxassay_011048_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_011048_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_011048_11
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_011048_11
TS23: thymus primordium Weak Regionally restricted euxassay_011048_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_011048_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_011048_11

Specimen euxassay_011048_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Weak Regionally restricted euxassay_011048_12
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011048_12
TS23: renal cortex Weak Regionally restricted euxassay_011048_12
TS23: lung Weak Regionally restricted euxassay_011048_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_011048_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_011048_12
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_011048_12
TS23: thymus primordium Weak Regionally restricted euxassay_011048_12
TS23: upper jaw incisor Weak Regionally restricted euxassay_011048_12
TS23: lower jaw incisor Weak Regionally restricted euxassay_011048_12

Specimen euxassay_011048_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011048_13
TS23: lung Weak Regionally restricted euxassay_011048_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_011048_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_011048_13
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_011048_13
TS23: thymus primordium Weak Regionally restricted euxassay_011048_13
TS23: trachea Weak Regionally restricted euxassay_011048_13
TS23: upper jaw incisor Weak Regionally restricted euxassay_011048_13
TS23: lower jaw incisor Weak Regionally restricted euxassay_011048_13

Specimen euxassay_011048_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_011048_14
TS23: lung Weak Regionally restricted euxassay_011048_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_011048_14
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_011048_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_011048_14
TS23: thoracic ganglion Weak Regionally restricted euxassay_011048_14
TS23: thymus primordium Weak Regionally restricted euxassay_011048_14
TS23: trachea Weak Regionally restricted euxassay_011048_14

Specimen euxassay_011048_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_011048_15
TS23: vomeronasal organ Weak Regionally restricted euxassay_011048_15
TS23: olfactory epithelium Weak Regionally restricted euxassay_011048_15
TS23: lung Weak Regionally restricted euxassay_011048_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_011048_15
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_011048_15
TS23: thymus primordium Weak Regionally restricted euxassay_011048_15

Specimen euxassay_011048_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_011048_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_011048_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011048_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_011048_16
TS23: lung Weak Regionally restricted euxassay_011048_16
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011048_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_011048_16
TS23: upper jaw incisor Weak Regionally restricted euxassay_011048_16
TS23: lower jaw incisor Weak Regionally restricted euxassay_011048_16

Specimen euxassay_011048_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_011048_17
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_011048_17
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011048_17
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_011048_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_011048_17
TS23: lung Weak Regionally restricted euxassay_011048_17
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011048_17
TS23: cervical ganglion Weak Regionally restricted euxassay_011048_17
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_011048_17
TS23: upper jaw incisor Moderate Regionally restricted euxassay_011048_17
TS23: lower jaw incisor Moderate Regionally restricted euxassay_011048_17

Specimen euxassay_011048_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_011048_18
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011048_18
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011048_18
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_011048_18
TS23: vestibulo-cochlear ganglion Weak Regionally restricted euxassay_011048_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_011048_18
TS23: renal cortex Moderate Regionally restricted euxassay_011048_18
TS23: lung Weak Regionally restricted euxassay_011048_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_011048_18
TS23: upper jaw molar Weak Regionally restricted euxassay_011048_18
TS23: lower jaw molar Weak Regionally restricted euxassay_011048_18

Specimen euxassay_011048_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_011048_19
TS23: dorsal root ganglion Weak Regionally restricted euxassay_011048_19
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011048_19
TS23: glossopharyngeal ganglion Weak Regionally restricted euxassay_011048_19
TS23: olfactory epithelium Weak Regionally restricted euxassay_011048_19
TS23: renal cortex Moderate Regionally restricted euxassay_011048_19
TS23: lung Weak Regionally restricted euxassay_011048_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_011048_19
TS23: upper jaw molar Weak Regionally restricted euxassay_011048_19
TS23: lower jaw molar Weak Regionally restricted euxassay_011048_19

Specimen euxassay_011048_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_011048_20
TS23: vibrissa Weak Regionally restricted euxassay_011048_20
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011048_20
TS23: facial ganglion Weak Regionally restricted euxassay_011048_20
TS23: renal cortex Moderate Regionally restricted euxassay_011048_20
TS23: lung Weak Regionally restricted euxassay_011048_20

Specimen euxassay_011048_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_011048_21
TS23: vibrissa Weak Regionally restricted euxassay_011048_21
TS23: trigeminal ganglion Weak Regionally restricted euxassay_011048_21
TS23: facial ganglion Weak Regionally restricted euxassay_011048_21
TS23: renal cortex Moderate Regionally restricted euxassay_011048_21
TS23: lung Weak Regionally restricted euxassay_011048_21

Specimen euxassay_011048_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_011048_22
TS23: vibrissa Weak Regionally restricted euxassay_011048_22
TS23: lung Weak Regionally restricted euxassay_011048_22

Specimen euxassay_011048_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_011048_23


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory