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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823868
Gene symbol: Chst2
Gene name: carbohydrate sulfotransferase 2
Probe: T38675
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_012897_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Weak Regionally restricted euxassay_012897_01
TS23: foot mesenchyme Weak Regionally restricted euxassay_012897_01

Specimen euxassay_012897_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Weak Regionally restricted euxassay_012897_02
TS23: foot mesenchyme Weak Regionally restricted euxassay_012897_02

Specimen euxassay_012897_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Weak Regionally restricted euxassay_012897_03
TS23: foot mesenchyme Weak Regionally restricted euxassay_012897_03

Specimen euxassay_012897_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Weak Regionally restricted euxassay_012897_04

Specimen euxassay_012897_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012897_05
TS23: amygdala Present euxassay_012897_05
TS23: head mesenchyme Weak Regionally restricted euxassay_012897_05

Specimen euxassay_012897_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012897_06
TS23: amygdala Present euxassay_012897_06
TS23: pons mantle layer Weak Spotted euxassay_012897_06
TS23: upper jaw molar Moderate Regionally restricted euxassay_012897_06
TS23: lower jaw molar Moderate Regionally restricted euxassay_012897_06

Specimen euxassay_012897_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Weak Regionally restricted euxassay_012897_07
TS23: medulla oblongata basal plate mantle layer Weak Spotted euxassay_012897_07
TS23: upper jaw molar Strong Regionally restricted euxassay_012897_07
TS23: lower jaw molar Strong Regionally restricted euxassay_012897_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_012897_07
TS23: upper lip Weak Regionally restricted euxassay_012897_07

Specimen euxassay_012897_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Weak Regionally restricted euxassay_012897_08
TS23: medulla oblongata basal plate mantle layer Weak Spotted euxassay_012897_08
TS23: pancreas Weak Regionally restricted euxassay_012897_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_012897_08
TS23: upper lip Weak Regionally restricted euxassay_012897_08

Specimen euxassay_012897_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012897_09
TS23: medulla oblongata basal plate mantle layer Weak Spotted euxassay_012897_09
TS23: pons mantle layer Weak Spotted euxassay_012897_09
TS23: pancreas Weak Regionally restricted euxassay_012897_09
TS23: upper lip Weak Regionally restricted euxassay_012897_09
TS23: lower lip Weak Regionally restricted euxassay_012897_09

Specimen euxassay_012897_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012897_10
TS23: medulla oblongata basal plate mantle layer Weak Spotted euxassay_012897_10
TS23: pons mantle layer Weak Spotted euxassay_012897_10
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012897_10
TS23: inferior colliculus Present euxassay_012897_10
TS23: upper jaw incisor Weak Regionally restricted euxassay_012897_10
TS23: lower jaw incisor Weak Regionally restricted euxassay_012897_10
TS23: ventral grey horn Weak Regionally restricted euxassay_012897_10
TS23: pancreas Weak Regionally restricted euxassay_012897_10
TS23: upper lip Weak Regionally restricted euxassay_012897_10
TS23: lower lip Weak Regionally restricted euxassay_012897_10

Specimen euxassay_012897_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pons mantle layer Weak Spotted euxassay_012897_11
TS23: medulla oblongata basal plate mantle layer Weak Spotted euxassay_012897_11
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012897_11
TS23: inferior colliculus Present euxassay_012897_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_012897_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_012897_11
TS23: ventral grey horn Weak Regionally restricted euxassay_012897_11
TS23: pancreas Weak Regionally restricted euxassay_012897_11
TS23: upper lip Weak Regionally restricted euxassay_012897_11
TS23: lower lip Weak Regionally restricted euxassay_012897_11

Specimen euxassay_012897_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Weak Regionally restricted euxassay_012897_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_012897_12
TS23: medulla oblongata basal plate mantle layer Weak Spotted euxassay_012897_12
TS23: ventral grey horn Weak Regionally restricted euxassay_012897_12
TS23: upper lip Weak Regionally restricted euxassay_012897_12
TS23: lower lip Weak Regionally restricted euxassay_012897_12

Specimen euxassay_012897_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: hypothalamus mantle layer Weak Regionally restricted euxassay_012897_13
TS23: medulla oblongata basal plate mantle layer Weak Spotted euxassay_012897_13
TS23: pons mantle layer Weak Spotted euxassay_012897_13
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_012897_13
TS23: inferior colliculus Present euxassay_012897_13
TS23: ventral grey horn Weak Regionally restricted euxassay_012897_13
TS23: lower lip Weak Regionally restricted euxassay_012897_13
TS23: upper lip Weak Regionally restricted euxassay_012897_13

Specimen euxassay_012897_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Weak Regionally restricted euxassay_012897_14
TS23: medulla oblongata basal plate mantle layer Weak Spotted euxassay_012897_14
TS23: pons mantle layer Weak Spotted euxassay_012897_14
TS23: upper jaw incisor Weak Regionally restricted euxassay_012897_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_012897_14
TS23: ventral grey horn Weak Regionally restricted euxassay_012897_14
TS23: lower lip Weak Regionally restricted euxassay_012897_14
TS23: upper lip Weak Regionally restricted euxassay_012897_14

Specimen euxassay_012897_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Moderate Regionally restricted euxassay_012897_15
TS23: pons mantle layer Weak Spotted euxassay_012897_15
TS23: medulla oblongata basal plate mantle layer Weak Spotted euxassay_012897_15
TS23: upper jaw incisor Weak Regionally restricted euxassay_012897_15
TS23: ventral grey horn Weak Regionally restricted euxassay_012897_15
TS23: pancreas Weak Regionally restricted euxassay_012897_15
TS23: upper lip Weak Regionally restricted euxassay_012897_15
TS23: lower lip Weak Regionally restricted euxassay_012897_15

Specimen euxassay_012897_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Weak Regionally restricted euxassay_012897_16
TS23: pancreas Weak Regionally restricted euxassay_012897_16
TS23: submandibular gland primordium Weak Regionally restricted euxassay_012897_16
TS23: upper lip Weak Regionally restricted euxassay_012897_16
TS23: lower lip Weak Regionally restricted euxassay_012897_16

Specimen euxassay_012897_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thalamus mantle layer Weak Regionally restricted euxassay_012897_17
TS23: medulla oblongata basal plate mantle layer Weak Spotted euxassay_012897_17
TS23: pons mantle layer Weak Spotted euxassay_012897_17
TS23: upper jaw incisor Weak Regionally restricted euxassay_012897_17
TS23: pancreas Weak Regionally restricted euxassay_012897_17
TS23: submandibular gland primordium Weak Regionally restricted euxassay_012897_17
TS23: upper lip Weak Regionally restricted euxassay_012897_17

Specimen euxassay_012897_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Weak Spotted euxassay_012897_18
TS23: lower jaw molar Moderate Regionally restricted euxassay_012897_18
TS23: upper jaw molar Weak Regionally restricted euxassay_012897_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_012897_18
TS23: upper lip Weak Regionally restricted euxassay_012897_18

Specimen euxassay_012897_19: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012897_19
TS23: amygdala Present euxassay_012897_19
TS23: lower jaw molar Moderate Regionally restricted euxassay_012897_19
TS23: upper jaw molar Moderate Regionally restricted euxassay_012897_19

Specimen euxassay_012897_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_012897_20
TS23: amygdala Present euxassay_012897_20
TS23: head mesenchyme Weak Regionally restricted euxassay_012897_20

Specimen euxassay_012897_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Weak Regionally restricted euxassay_012897_21

Specimen euxassay_012897_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Weak Regionally restricted euxassay_012897_22
TS23: foot mesenchyme Weak Regionally restricted euxassay_012897_22

Specimen euxassay_012897_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Weak Regionally restricted euxassay_012897_23
TS23: foot mesenchyme Weak Regionally restricted euxassay_012897_23

Specimen euxassay_012897_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: foot mesenchyme Weak Regionally restricted euxassay_012897_24


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/05/2021
MGI 6.17
The Jackson Laboratory