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Gene Expression Data
Assay Details
Assay
Reference: J:127119 Visel A, et al., Regulatory pathway analysis by high-throughput in situ hybridization. PLoS Genet. 2007 Oct 19;3(10):1867-83
Assay type: RNA in situ
MGI Accession ID: MGI:3767051
Gene symbol: Bcan
Gene name: brevican
Probe: MH782 probe 694
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Results
Specimen 5 Bcan: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: tongue Absent 5_Bcan
TS22: face Absent 5_Bcan Expression was absent in Face/Soft Tissues.
TS22: tail Weak Regionally restricted 5_Bcan
TS22: forelimb Weak Regionally restricted 5_Bcan
TS22: hindlimb Weak Regionally restricted 5_Bcan
TS22: genital tubercle Absent 5_Bcan
TS22: skin Absent 5_Bcan
TS22: lung Absent 5_Bcan
TS22: metanephros Absent 5_Bcan
TS22: salivary gland Absent 5_Bcan
TS22: tooth Absent 5_Bcan
TS22: vibrissa follicle Absent 5_Bcan
TS22: esophagus Absent 5_Bcan
TS22: stomach Absent 5_Bcan
TS22: intestine Absent 5_Bcan
TS22: cochlea Weak Regionally restricted 5_Bcan
TS22: inner ear labyrinth Absent 5_Bcan
TS22: olfactory epithelium Weak Regionally restricted 5_Bcan
TS22: retina Absent 5_Bcan
TS22: basal forebrain Present Regionally restricted 5_Bcan
TS22: piriform cortex Present Patchy 5_Bcan
TS22: amygdala Present Patchy 5_Bcan
TS22: pretectum Strong Patchy 5_Bcan
TS22: dorsal root ganglion Absent 5_Bcan
TS22: cranial ganglion Absent 5_Bcan
TS22: corpus striatum Present Patchy 5_Bcan
TS22: pallidum Strong Regionally restricted 5_Bcan
TS22: midbrain tegmentum Strong Regionally restricted 5_Bcan
TS22: spinal cord Strong Regionally restricted 5_Bcan
TS22: pons Strong Regionally restricted 5_Bcan
TS22: medulla oblongata Strong Patchy 5_Bcan
TS22: telencephalon septum Strong Regionally restricted 5_Bcan
TS22: thalamus Present Regionally restricted 5_Bcan
TS22: hypothalamus Strong Regionally restricted 5_Bcan
TS22: cerebellum Present Regionally restricted 5_Bcan
TS22: superior colliculus Weak Regionally restricted 5_Bcan
TS22: inferior colliculus Strong Regionally restricted 5_Bcan
TS22: main olfactory bulb Weak Regionally restricted 5_Bcan
TS22: neocortex Present Regionally restricted 5_Bcan
TS22: hippocampus Strong Regionally restricted 5_Bcan
TS22: ureter Absent 5_Bcan
TS22: bladder Absent 5_Bcan
TS22: urethra Absent 5_Bcan
TS22: main bronchus Absent 5_Bcan
TS22: trachea Weak Regionally restricted 5_Bcan
TS22: palatal shelf Absent 5_Bcan
TS22: middle ear Absent 5_Bcan
TS22: pharynx Absent 5_Bcan
TS22: larynx Absent 5_Bcan
TS22: optic nerve Absent 5_Bcan
TS22: liver Absent 5_Bcan
TS22: thymus primordium Absent 5_Bcan
TS22: thyroid gland Absent 5_Bcan
TS22: pituitary gland Absent 5_Bcan
TS22: pancreas Absent 5_Bcan
TS22: spleen primordium Absent 5_Bcan Expression was absent in Spleen.
TS22: adrenal gland Absent 5_Bcan
TS22: gonad Weak Regionally restricted 5_Bcan
TS22: musculature Absent 5_Bcan Expression was absent in Muscle System.
TS22: choroid plexus Absent 5_Bcan
TS22: meninges Absent 5_Bcan
TS22: blood vessel Absent 5_Bcan
TS22: heart atrium Absent 5_Bcan
TS22: heart ventricle Absent 5_Bcan
TS22: appendicular skeleton Weak Regionally restricted 5_Bcan
TS22: axial skeleton Weak Regionally restricted 5_Bcan
TS22: cranium Absent 5_Bcan
TS22: facial bone primordium Weak Regionally restricted 5_Bcan
TS22: lens Absent 5_Bcan
TS22: cornea Absent 5_Bcan

Specimen 7D: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: cerebral cortex Present 7D

Specimen 8C1: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Present 8C1

Specimen 8C2: embryonic day 15.5; Pax6Sey/Pax6Sey (more )
Structure Level Pattern Image Note
TS23: cerebral cortex Present 8C2 Expression in the mutant cortex was altered compared to wild type.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/19/2021
MGI 6.17
The Jackson Laboratory