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Gene Expression Data
Assay Details
Assay
Reference: J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
Assay type: RNA in situ
MGI Accession ID: MGI:3586197
Gene symbol: Ndn
Gene name: necdin, MAGE family member
Probe: UI-M-CC0-ayf-c-01-0-UI.s1
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: This data is from Supplemental Table 5, Gene column, row: 250919 necdin. After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde prior to processing.
Results
Specimen E12: embryonic day 12.0 (more )
Structure Level Pattern Image Note
TS20: neural retinal epithelium Present Regionally restricted Expression was detected in the inner neuroblastic layer in the central retina.

Specimen E14: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: neural retinal epithelium Present Regionally restricted Expression was detected in the inner neuroblastic layer and a subset of cells in the outer neuroblastic layer. The expression level was higher in the inner neuroblastic layer.

Specimen E16: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: retina nuclear layer Present Regionally restricted Submitted Image - AF56e16.5 , S10_necdin E16 Expression was detected in the inner neuroblastic layer and was weak in a subset of cells in the outer neuroblastic layer.

Specimen E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: retina inner nuclear layer Present S10_necdin E18 , Submitted Image - AF56e18.5 Expression was detected in the inner neuroblastic layer.

Specimen P0/1: postnatal day 0-1 (more )
Structure Level Pattern Image Note
TS27: retina inner nuclear layer Weak Submitted Image - AF56p1.5 , S10_necdin P0 Expression was detected in the inner neuroblastic layer.

Specimen P2/3: postnatal day 2-3 (more )
Structure Level Pattern Image Note
TS27: retina inner nuclear layer Weak S10_necdin P2 , Submitted Image - AF56p3.5 Expression was detected in the inner neuroblastic layer.

Specimen P4/5: postnatal day 4-5 (more )
Structure Level Pattern Image Note
TS28: retina inner nuclear layer Weak S10_necdin P4 Expression was detected in the inner neuroblastic layer.

Specimen P6/7: postnatal day 6-7 (more )
Structure Level Pattern Image Note
TS28: retina layer Weak Regionally restricted S10_necdin P6 , Submitted Image - AF56p6.5 Expression was detected in amacrine cells.
TS28: retina ganglion cell layer Weak S10_necdin P6 , Submitted Image - AF56p6.5

Specimen P8/10: postnatal day 8-10 (more )
Structure Level Pattern Image Note
TS28: retina layer Present Regionally restricted S10_necdin P8 , Submitted Image - AF56p8.5 Expression was detected in amacrine cells and a small subset of horizontal cells.
TS28: retina ganglion cell layer Present S10_necdin P8 , Submitted Image - AF56p8.5

Specimen Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina layer Present Regionally restricted Submitted Image - AF56adult , S10_necdin Adult Expression was detected in a subset of amacrine cells.
TS28: retina ganglion cell layer Present Regionally restricted Submitted Image - AF56adult , S10_necdin Adult Expression was detected in a subset of ganglion cells.

Specimen CNS: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: central nervous system Present Expression was widespread.
TS28: cerebellum Absent
TS28: cerebral cortex Weak Regionally restricted Expression was low outside of layer 6 of the cortex.

Specimen Embryo: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: central nervous system Present
TS24: peripheral nervous system Present
TS24: cerebral cortex Absent


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/07/2024
MGI 6.23
The Jackson Laboratory