About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
Assay type: RNA in situ
MGI Accession ID: MGI:3586056
Gene symbol: Col16a1
Gene name: collagen, type XVI, alpha 1
Probe: UI-M-AO0-aca-d-06-0-UI.s1
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Assay notes: This data is from Supplemental Table 5, Gene column, row: 41860 Procollagen, type XI, alpha . After cryosectioning, tissue was fixed for 10' in 4% paraformaldehyde prior to processing.
Results
Specimen E14: embryonic day 14.0 (more )
Structure Level Pattern Image Note
TS22: retina Absent

Specimen E16: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: retina Absent

Specimen E18: embryonic day 18.0 (more )
Structure Level Pattern Image Note
TS26: retina Absent Submitted Image - 12aE18 , Submitted Image - 12aE18B

Specimen P0/1: postnatal day 0-1 (more )
Structure Level Pattern Image Note
TS27: retina Absent Submitted Image - 12aP1.5 , Submitted Image - 12aP0.5

Specimen P2/3: postnatal day 2-3 (more )
Structure Level Pattern Image Note
TS27: retina inner nuclear layer Present Regionally restricted Submitted Image - 12aP2.5B , Submitted Image - 12aP3.5 , Submitted Image - 12aP2.5 Expression was detected in the scleral inner neuroblastic layer.

Specimen P4/5: postnatal day 4-5 (more )
Structure Level Pattern Image Note
TS28: retina inner nuclear layer Present Regionally restricted Submitted Image - 12aP4.5 , Submitted Image - 12aP5.5 Expression was detected in the scleral inner neuroblastic layer.

Specimen P6/7: postnatal day 6-7 (more )
Structure Level Pattern Image Note
TS28: retina layer Present Regionally restricted Submitted Image - 12aP7.5 , Submitted Image - 12aP6.5 Expression was detected in amacrine cells.

Specimen P8/10: postnatal day 8-10 (more )
Structure Level Pattern Image Note
TS28: retina layer Present Regionally restricted Submitted Image - 12aP8.5 , Submitted Image - 12aP10.5 , Submitted Image - 12aP9.5 Expression was detected in amacrine cells.

Specimen Adult: postnatal adult (more )
Structure Level Pattern Image Note
TS28: retina outer nuclear layer Present Regionally restricted Submitted Image - 12aAdultB , Submitted Image - 12aAdult Expression was detected in the inner segment.
TS28: retina layer Present Regionally restricted Submitted Image - 12aAdult , Submitted Image - 12aAdultB Expression was detected in amacrine cells.

Specimen CNS: postnatal day 6 (more )
Structure Level Pattern Image Note
TS28: meninges Present
TS28: central nervous system Present Expression was widespread.

Specimen Embryo: embryonic day 16.0 (more )
Structure Level Pattern Image Note
TS24: embryo Present Regionally restricted Expression was detected in basement membrane.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
01/14/2020
MGI 6.14
The Jackson Laboratory