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Gene Expression Data
Assay Details
Assay
Reference: J:85124 Sousa-Nunes R, et al., Characterizing embryonic gene expression patterns in the mouse using nonredundant sequence-based selection. Genome Res. 2003 Dec;13(12):2609-20
Assay type: RNA in situ
MGI Accession ID: MGI:2683301
Gene symbol: Slc39a5
Gene name: solute carrier family 39 (metal ion transporter), member 5
Probe: s8609b24
Probe preparation: Antisense RNA labelled with digoxigenin
Visualized with: Alkaline phosphatase
Results
Specimen E6.0: embryonic day 6.0 (more )
Structure Level Pattern Image Note
TS8: extraembryonic visceral endoderm Present Regionally restricted Expression occurs in the visceral endoderm overlying the extra-embryonic portion of the conceptus and the most proximal region of the epiblast.

Specimen E6.5: embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: extraembryonic visceral endoderm Present Regionally restricted 1A s8609b24_6.5 Visceral endoderm expression covers most of the conceptus, although it is weaker distally and completely absent from the most proximal region.

Specimen E7.5: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: extraembryonic visceral endoderm Present Regionally restricted 1A s8609b24_7.5 Expression persists in the progeny of the visceral endoderm cells, coming to lie over the extra-embryonic ectoderm; transcripts are still absent from the most proximal visceral endoderm.

Specimen E8.5: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: yolk sac Present 1A s8609b24_8.5
TS13: embryo Absent 1A s8609b24_8.5
TS13: extraembryonic vascular system Absent 1A s8609b24_8.5

Specimen E9.5: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: embryo Weak Uniform 1A s8609b24_9.5 There is widespread, albeit weak, expression in the embryo proper
TS15: 1st branchial arch Present 1A s8609b24_9.5
TS15: 2nd branchial arch Present 1A s8609b24_9.5
TS15: 3rd branchial arch Present 1A s8609b24_9.5
TS15: future forebrain Present 1A s8609b24_9.5
TS15: gut Present 1A s8609b24_9.5
TS15: future midbrain Present Regionally restricted 1A s8609b24_9.5 Expression is detected in the anterior forebrain.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory