About   Help   FAQ
Phenotypes Associated with This Genotype
Genotype
MGI:3766011
Allelic
Composition
Raratm1Ipc/Raratm1Ipc
Genetic
Background
involves: 129S2/SvPas * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Raratm1Ipc mutation (1 available); any Rara mutation (77 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
skeleton
• 73% of mutants exhibit malformed skeletons
• 4 of 15 mutants exhibit a malformed squamosal bone
• 1 of 15 mutants show a thyroid cartilage fused to hyoid bone
• 1 of 15 mutants show tracheal cartilage abnormalities
• 6 of 15 (40%) mutants show fusion of C1-AA with C2 dens
• 1 of 15 mutants show fusions of neural arches of C2 and C3
• 3 of 15 (20%) mutants show anterior transformation of T8 to T7
• 1 of 15 mutants show anterior transformation of C2 to C1
• 3 of 15 mutants show posterior transformation of C7 to T1
• 2 of 15 mutants show anterior transformation of L1 to T14

vision/eye
• display a mild reduction of the palpebral aperture at E14.5

craniofacial
• 4 of 15 mutants exhibit a malformed squamosal bone

respiratory system
• 1 of 15 mutants show a thyroid cartilage fused to hyoid bone
• 1 of 15 mutants show tracheal cartilage abnormalities

reproductive system
• young adult male homozygotes show a striking decrease in the number of epididymal spermatozoa relative to wild-type controls
• most of the remaining mutant epididymal spermatozoa appear defective relative to those of wild-type controls
• ~77% of mutant step 8-9 spermatids are randomly oriented with regard to the basal aspect of Sertoli cells in putative stage VIII-IX tubules relative to ~4% of controls
• four (instead of expected three) layers of germ cells are detected in putative stage IX, where late spermatids are retained in the epithelia
• at putative stage VIII, no alignment of mature spermatids at the surface of tubular lumen is observed
• no entrenchment of spermatids within more basal aspects of Sertoli cells is observed in putative stage IV
• at 6 weeks of age, TUNEL-positive, peripherally-located elongated spermatids at steps 10-11 of spermiogenesis are noted in mutant testes but never in wild-type testes; the frequency of TUNEL-positive elongated spermatids decreases by 8 and 9 weeks of age
• at 6 weeks of age, TUNEL-positive apoptotic elongated spermatids are detected when deeply embedded in the seminiferous epithelium
• apoptosis of elongating spermatids does not appear to involve pathways mediated by activated caspase-3
• similar to wild-type testes, mutant testes show the highest number of TUNEL-positive germ cells (not including elongated spermatids) at 3-weeks of age; however, mutant testes show a second peak of apoptosis at ~6 weeks, which then drops at 7, 8 and 9 weeks
• young adult male homozygotes show specific defects in spermiogenesis, which may correlate with a failure in both spermatid release and spermatid orientation to the basal aspect of Sertoli cells at putative stage VIII

cellular
• young adult male homozygotes show a striking decrease in the number of epididymal spermatozoa relative to wild-type controls
• most of the remaining mutant epididymal spermatozoa appear defective relative to those of wild-type controls
• ~77% of mutant step 8-9 spermatids are randomly oriented with regard to the basal aspect of Sertoli cells in putative stage VIII-IX tubules relative to ~4% of controls
• four (instead of expected three) layers of germ cells are detected in putative stage IX, where late spermatids are retained in the epithelia
• at putative stage VIII, no alignment of mature spermatids at the surface of tubular lumen is observed
• no entrenchment of spermatids within more basal aspects of Sertoli cells is observed in putative stage IV
• at 6 weeks of age, TUNEL-positive, peripherally-located elongated spermatids at steps 10-11 of spermiogenesis are noted in mutant testes but never in wild-type testes; the frequency of TUNEL-positive elongated spermatids decreases by 8 and 9 weeks of age
• at 6 weeks of age, TUNEL-positive apoptotic elongated spermatids are detected when deeply embedded in the seminiferous epithelium
• apoptosis of elongating spermatids does not appear to involve pathways mediated by activated caspase-3
• similar to wild-type testes, mutant testes show the highest number of TUNEL-positive germ cells (not including elongated spermatids) at 3-weeks of age; however, mutant testes show a second peak of apoptosis at ~6 weeks, which then drops at 7, 8 and 9 weeks


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/25/2025
MGI 6.24
The Jackson Laboratory