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Phenotypes associated with this allele
Allele Symbol
Allele Name
Allele ID
Atg16l1Gt(BC0122)Wtsi
gene trap BC0122, Wellcome Trust Sanger Institute
MGI:3818574
Summary 2 genotypes
Jump to Allelic Composition Genetic Background Genotype ID
hm1
Atg16l1Gt(BC0122)Wtsi/Atg16l1Gt(BC0122)Wtsi involves: 129P2/OlaHsd * C57BL/6 MGI:3818603
cx2
Atg16l1Gt(BC0122)Wtsi/Atg16l1Gt(BC0122)Wtsi
Tg(CAG-EGFP/Map1lc3b)53Nmz/0
involves: 129P2/OlaHsd * C57BL/6NCrj MGI:5313721


Genotype
MGI:3818603
hm1
Allelic
Composition
Atg16l1Gt(BC0122)Wtsi/Atg16l1Gt(BC0122)Wtsi
Genetic
Background
involves: 129P2/OlaHsd * C57BL/6
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Atg16l1Gt(BC0122)Wtsi mutation (1 available); any Atg16l1 mutation (44 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
digestive/alimentary system
• aberrant, disorganized granules as well as decreased granule numbers are observed in these mice
• virtually all Paneth cells have lysozyme localized throughout the cell instead of being discretely packaged within vesicles
• Paneth cells also have degenerating mitochondria, loss of granules and the frequent absence of apical microvilli
• adjacent crypt lumen often contains intact Paneth granules and cytoplasm, which is a phenomenon not observed in wild-type controls

homeostasis/metabolism
• autophagy by the ileal epithelium and thymocytes is severely reduced in these mice

cellular
• autophagy by the ileal epithelium and thymocytes is severely reduced in these mice

endocrine/exocrine glands
• aberrant, disorganized granules as well as decreased granule numbers are observed in these mice
• virtually all Paneth cells have lysozyme localized throughout the cell instead of being discretely packaged within vesicles
• Paneth cells also have degenerating mitochondria, loss of granules and the frequent absence of apical microvilli
• adjacent crypt lumen often contains intact Paneth granules and cytoplasm, which is a phenomenon not observed in wild-type controls

reproductive system
N
• when mated with wild-type males of proven fertility, females show normal fertility with no significant differences in the number of pups per litter relative to controls
• in culture, hormonally stimulated endometrial cells show normal decidualization with increased mRNA expression of the decidualization marker Prp
• in vivo, upon oil-induced artificial decidualization, stimulated uterine horns exhibit increased uterine weight, indicative of proper decidualization

Mouse Models of Human Disease
DO ID OMIM ID(s) Ref(s)
inflammatory bowel disease 10 DOID:0110885 OMIM:611081
J:141419




Genotype
MGI:5313721
cx2
Allelic
Composition
Atg16l1Gt(BC0122)Wtsi/Atg16l1Gt(BC0122)Wtsi
Tg(CAG-EGFP/Map1lc3b)53Nmz/0
Genetic
Background
involves: 129P2/OlaHsd * C57BL/6NCrj
Find Mice Using the International Mouse Strain Resource (IMSR)
Mouse lines carrying:
Atg16l1Gt(BC0122)Wtsi mutation (1 available); any Atg16l1 mutation (44 available)
Tg(CAG-EGFP/Map1lc3b)53Nmz mutation (5 available)
phenotype observed in females
phenotype observed in males
N normal phenotype
cellular
• reduced exercised-induced autophagy in skeletal muscles compared to in wild-type muscles

homeostasis/metabolism
• reduced exercised-induced autophagy in skeletal muscles compared to in wild-type muscles





Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
04/16/2024
MGI 6.23
The Jackson Laboratory