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Targeted Allele Detail
Symbol: Snx5tm1a(KOMP)Wtsi
Name: sorting nexin 5; targeted mutation 1a, Wellcome Trust Sanger Institute
MGI ID: MGI:4362512
Gene: Snx5  Location: Chr2:144250123-144270902 bp, - strand  Genetic Position: Chr2, 70.98 cM, cytoband H1
Mutant Cell Lines:  EPD0033_3_A06, EPD0033_3_A07, EPD0033_3_A08, EPD0033_3_B06, EPD0033_3_B07, EPD0033_3_B08, EPD0033_3_C07, EPD0033_3_C08, EPD0033_3_D06, EPD0033_3_D07, EPD0033_3_D08, EPD0033_3_E06, EPD0033_3_E07, EPD0033_3_E08, EPD0033_3_F06, EPD0033_3_F07, EPD0033_3_F08, EPD0033_3_G06, EPD0033_3_G07, EPD0033_3_G08, EPD0033_3_H07, EPD0033_3_H08
Germline Transmission:  Earliest citation of germline transmission: J:175295
Parent Cell Line:  JM8.F6 (ES Cell)
Strain of Origin:  C57BL/6N
Project Collection: KOMP-CSD
Allele Type:    Targeted (Conditional ready, Null/knockout, Reporter)
Mutation:    Insertion     Vector: L1L2_gt0
Mutation detailsThe L1L2_gt0 cassette was inserted at position 144259662 of Chromosome 2 upstream of the critical exon(s) (Build GRCm38). The cassette is composed of an FRT flanked lacZ/neomycin sequence followed by a loxP site. An additional loxP site is inserted downstream of the targeted exon(s) at position 144258761. The critical exon(s) is/are thus flanked by loxP sites. A "conditional ready" (floxed) allele can be created by flp recombinase expression in mice carrying this allele. Subsequent cre expression results in a knockout mouse. If cre expression occurs without flp expression, a reporter knockout mouse will be created. Further information on targeting strategies used for this and other IKMC alleles can be found at http://www.informatics.jax.org/mgihome/nomen/IKMC_schematics.shtml (J:148605, J:173534)
View phenotypes and curated references for all genotypes (concatenated display).
In Structures Affected by this Mutation: 2 anatomical structures
Find Mice (IMSR)
Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
Carrying this Mutation:  Mouse Strains: 3 strains available      Cell Lines: 2 lines available
Carrying any Snx5 Mutation:  4 strains or lines available
Original:  J:148605 Wellcome Trust Sanger Institute, Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute. MGI Direct Data Submission. 2009;
All:  4 reference(s)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
MGI 6.14
The Jackson Laboratory