Kdm3b^{Gt(YTC406)Byg}
Gene trapped Allele Detail

Summary

• Symbol: Kdm3b^{Gt(YTC406)Byg}
• Name: KDM3B lysine (K)-specific demethylase 3B; gene trap YTC406, BayGenomics
• MGI ID: MGI:3885186
• Gene: Kdm3b Location: Chr18:34910100-34971713 bp, + strand Genetic Position: Chr18, 18.73 cM, cytoband B3
• Alliance: Kdm3b^{Gt(YTC406)Byg} page

Mutation origin

• Mutant Cell Line: YTC406
• Germline Transmission: Earliest citation of germline transmission: J:320447
• Parent Cell Line: Other (see notes) (ES Cell)
• Strain of Origin: 129P2/OlaHsd

Mutation description

• Allele Type: Gene trapped (Null/knockout)
• Mutation: Insertion of gene trap vector Vector: pGT0Lxf Vector Type: gene trap
• A gene trap vector inserted between exons 12 and 13. (J:320447)
• Sequence Tags: Sequence tag details (1 tag)

  Tag ID	GenBank ID	Method	Tag Location (trapped strand)*	Select
  YTC406	ER772200 ; (MGI Seq Detail)	5' RACE	Chr18:34943406-34952937 bp (+)
  * GRCm39; (strand of gene trap mutagenesis)

• Genome Context: Genome Browser view of this mutation;

  97 gene trap insertions have trapped this gene; View all gene trap sequence tags in this region

Expression

In Mice Carrying this Mutation:

1 RNA-Seq or microarray experiment(s)

Find Mice (IMSR)

• Mouse strains and cell lines available from the International Mouse Strain Resource (IMSR)
• Carrying this Mutation: Mouse Strains: 0 strains available Cell Lines: 0 lines available
• Carrying any Kdm3b Mutation: 139 strains or lines available

Notes

All BayGenomics gene trap mutations were generated in either CGR8 or E14TG2a (129P2/OlaHsd) parental ES cell lines, with the majority in subline E14TG2a.4. The specific ES cell line in which each mutation was made is not specified.

References

• Original: J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008
• All: 3 reference(s)