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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4829177
Gene symbol: Vstm2a
Gene name: V-set and transmembrane domain containing 2A
Probe: MGC clone 38877
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004356_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Moderate Regionally restricted euxassay_004356_01
Specimen euxassay_004356_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_02
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_02
TS23: head mesenchyme Moderate Regionally restricted euxassay_004356_02
TS23: mandible Moderate Regionally restricted euxassay_004356_02
TS23: maxilla Moderate Regionally restricted euxassay_004356_02
TS23: knee mesenchyme Moderate Regionally restricted euxassay_004356_02
Specimen euxassay_004356_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_03
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_03
TS23: head mesenchyme Moderate Regionally restricted euxassay_004356_03
TS23: maxilla Moderate Regionally restricted euxassay_004356_03
TS23: mandible Moderate Regionally restricted euxassay_004356_03
TS23: knee mesenchyme Moderate Regionally restricted euxassay_004356_03
Specimen euxassay_004356_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_04
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_04
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_04
TS23: mandible Moderate Regionally restricted euxassay_004356_04
TS23: maxilla Moderate Regionally restricted euxassay_004356_04
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004356_04
Specimen euxassay_004356_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_05
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004356_05
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_05
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_05
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_05
TS23: maxilla Moderate Regionally restricted euxassay_004356_05
TS23: mandible Moderate Regionally restricted euxassay_004356_05
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004356_05
Specimen euxassay_004356_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_06
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004356_06
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_06
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_06
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_06
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_06
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_06
TS23: ventral grey horn Strong Regionally restricted euxassay_004356_06
TS23: maxilla Moderate Regionally restricted euxassay_004356_06
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004356_06
Specimen euxassay_004356_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_07
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004356_07
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_07
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_07
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_07
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_07
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_07
TS23: ventral grey horn Strong Regionally restricted euxassay_004356_07
Specimen euxassay_004356_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_08
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_08
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004356_08
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_08
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_08
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_08
TS23: ventral grey horn Strong Regionally restricted euxassay_004356_08
Specimen euxassay_004356_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_09
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_09
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004356_09
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_09
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_09
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_09
TS23: ventral grey horn Strong Regionally restricted euxassay_004356_09
Specimen euxassay_004356_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_004356_10
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_10
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_10
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_10
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004356_10
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_10
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_10
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_10
TS23: ventral grey horn Strong Regionally restricted euxassay_004356_10
Specimen euxassay_004356_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_11
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_11
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_11
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_11
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_11
TS23: ventral grey horn Strong Regionally restricted euxassay_004356_11
Specimen euxassay_004356_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex mantle layer Strong Regionally restricted euxassay_004356_12
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_12
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_12
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_12
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_12
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_12
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_12
TS23: ventral grey horn Strong Regionally restricted euxassay_004356_12
Specimen euxassay_004356_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_13
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004356_13
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_13
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_13
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_13
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_13
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_13
Specimen euxassay_004356_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_14
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_14
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_14
TS23: medulla oblongata basal plate mantle layer Strong Regionally restricted euxassay_004356_14
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_14
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_14
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_14
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004356_14
Specimen euxassay_004356_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_15
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_15
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_15
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_15
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_15
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_15
TS23: maxilla Moderate Regionally restricted euxassay_004356_15
TS23: mandible Moderate Regionally restricted euxassay_004356_15
TS23: foot mesenchyme Moderate Regionally restricted euxassay_004356_15
Specimen euxassay_004356_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_16
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_16
TS23: pons mantle layer Strong Regionally restricted euxassay_004356_16
TS23: midbrain mantle layer Strong Regionally restricted euxassay_004356_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004356_16
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004356_16
TS23: maxilla Moderate Regionally restricted euxassay_004356_16
TS23: mandible Moderate Regionally restricted euxassay_004356_16
TS23: head mesenchyme Moderate Regionally restricted euxassay_004356_16
TS23: knee mesenchyme Moderate Regionally restricted euxassay_004356_16
Specimen euxassay_004356_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_17
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_17
TS23: maxilla Moderate Regionally restricted euxassay_004356_17
TS23: mandible Moderate Regionally restricted euxassay_004356_17
TS23: head mesenchyme Moderate Regionally restricted euxassay_004356_17
TS23: knee mesenchyme Moderate Regionally restricted euxassay_004356_17
Specimen euxassay_004356_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_18
TS23: rest of cerebellum mantle layer Strong Regionally restricted euxassay_004356_18
TS23: maxilla Moderate Regionally restricted euxassay_004356_18
TS23: mandible Moderate Regionally restricted euxassay_004356_18
TS23: head mesenchyme Moderate Regionally restricted euxassay_004356_18
TS23: knee mesenchyme Moderate Regionally restricted euxassay_004356_18
Specimen euxassay_004356_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_19
TS23: head mesenchyme Moderate Regionally restricted euxassay_004356_19
Specimen euxassay_004356_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_20
TS23: head mesenchyme Moderate Regionally restricted euxassay_004356_20
Specimen euxassay_004356_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004356_21
TS23: head mesenchyme Moderate Regionally restricted euxassay_004356_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/21/2024
MGI 6.23 		The Jackson Laboratory