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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828484
Gene symbol: Stat1
Gene name: signal transducer and activator of transcription 1
Probe: MGC clone 6411
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004660_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_004660_03
Specimen euxassay_004660_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_004660_04
Specimen euxassay_004660_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_004660_05
Specimen euxassay_004660_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_004660_06
Specimen euxassay_004660_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_07
TS23: axial musculature Weak Regionally restricted euxassay_004660_07
Specimen euxassay_004660_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_08
TS23: pons mantle layer Weak Regionally restricted euxassay_004660_08 trigeminal motor nucleus
Specimen euxassay_004660_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_004660_09 facial motor nucleus
Specimen euxassay_004660_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_004660_10 facial motor nucleus
Specimen euxassay_004660_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Uniform euxassay_004660_11
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_11
Specimen euxassay_004660_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Uniform euxassay_004660_12
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_12
Specimen euxassay_004660_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Uniform euxassay_004660_13
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_13
Specimen euxassay_004660_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Uniform euxassay_004660_14
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_14
Specimen euxassay_004660_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: thymus primordium Strong Uniform euxassay_004660_15
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_15
Specimen euxassay_004660_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_004660_16 facial motor nucleus
Specimen euxassay_004660_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pectoral girdle and thoracic body wall muscle Strong Regionally restricted euxassay_004660_17
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_004660_17 facial motor nucleus
Specimen euxassay_004660_18: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: pons mantle layer Weak Regionally restricted euxassay_004660_18 trigeminal motor nucleus
Specimen euxassay_004660_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_004660_20
Specimen euxassay_004660_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial musculature Moderate Regionally restricted euxassay_004660_21
Specimen euxassay_004660_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: axial muscle Moderate Regionally restricted euxassay_004660_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/14/2024
MGI 6.23 		The Jackson Laboratory