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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828391
Gene symbol: Sox3
Gene name: SRY (sex determining region Y)-box 3
Probe: T55186
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019627_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019627_02
Specimen euxassay_019627_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019627_03
Specimen euxassay_019627_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_04
Specimen euxassay_019627_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_05
Specimen euxassay_019627_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_06
Specimen euxassay_019627_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_07
Specimen euxassay_019627_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_08
Specimen euxassay_019627_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_09
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_019627_09
Specimen euxassay_019627_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019627_10
Specimen euxassay_019627_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_11
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_019627_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019627_11
Specimen euxassay_019627_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Strong Regionally restricted euxassay_019627_12
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_12
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_019627_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019627_12
Specimen euxassay_019627_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_13
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019627_13
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019627_13
Specimen euxassay_019627_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019627_14
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019627_14
Specimen euxassay_019627_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019627_15
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019627_15
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_019627_15
Specimen euxassay_019627_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_16
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_019627_16
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_019627_16
Specimen euxassay_019627_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_17
TS23: olfactory cortex ventricular layer Moderate Regionally restricted euxassay_019627_17
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_019627_17
Specimen euxassay_019627_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: olfactory cortex ventricular layer Weak Regionally restricted euxassay_019627_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019627_18
Specimen euxassay_019627_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_019627_19
Specimen euxassay_019627_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_20
Specimen euxassay_019627_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_21
Specimen euxassay_019627_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_019627_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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05/07/2024
MGI 6.23 		The Jackson Laboratory