About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828316
Gene symbol: Smad5
Gene name: SMAD family member 5
Probe: T55178
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_019553_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_03
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019553_03
Specimen euxassay_019553_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: spleen primordium Strong Regionally restricted euxassay_019553_04
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_04
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019553_04
TS23: lung Weak Regionally restricted euxassay_019553_04
Specimen euxassay_019553_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_019553_05
TS23: spleen primordium Strong Regionally restricted euxassay_019553_05
TS23: telencephalon ventricular layer Strong Uniform euxassay_019553_05
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_019553_05
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_05
TS23: lung Moderate Regionally restricted euxassay_019553_05
TS23: saccule Weak Regionally restricted euxassay_019553_05
Specimen euxassay_019553_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_019553_06
TS23: spleen primordium Strong Regionally restricted euxassay_019553_06
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_06
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_019553_06
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_06
TS23: lung Moderate Regionally restricted euxassay_019553_06
TS23: saccule Moderate Regionally restricted euxassay_019553_06
Specimen euxassay_019553_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019553_07
TS23: vibrissa Moderate Regionally restricted euxassay_019553_07
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019553_07
TS23: spleen primordium Moderate Regionally restricted euxassay_019553_07
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_07
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_019553_07
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019553_07
TS23: lung Moderate Regionally restricted euxassay_019553_07
TS23: saccule Moderate Regionally restricted euxassay_019553_07
Specimen euxassay_019553_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019553_08
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019553_08
TS23: spleen primordium Moderate Regionally restricted euxassay_019553_08
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_08
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_019553_08
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019553_08
TS23: lung Moderate Regionally restricted euxassay_019553_08
TS23: saccule Moderate Regionally restricted euxassay_019553_08
Specimen euxassay_019553_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019553_09
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019553_09
TS23: upper jaw incisor Weak Regionally restricted euxassay_019553_09
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_09
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_019553_09
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019553_09
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_09
TS23: lung Moderate Regionally restricted euxassay_019553_09
TS23: saccule Moderate Regionally restricted euxassay_019553_09
Specimen euxassay_019553_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019553_10
TS23: upper jaw incisor Weak Regionally restricted euxassay_019553_10
TS23: lower jaw incisor Weak Regionally restricted euxassay_019553_10
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019553_10
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019553_10
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_10
TS23: lung Moderate Regionally restricted euxassay_019553_10
TS23: saccule Moderate Regionally restricted euxassay_019553_10
Specimen euxassay_019553_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019553_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_019553_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_019553_11
TS23: telencephalon ventricular layer Weak Uniform euxassay_019553_11
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019553_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019553_11
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019553_11
TS23: pons ventricular layer Weak Regionally restricted euxassay_019553_11
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019553_11
TS23: lung Weak Regionally restricted euxassay_019553_11
Specimen euxassay_019553_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019553_12
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019553_12
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019553_12
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019553_12
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_12
TS23: lung Moderate Regionally restricted euxassay_019553_12
Specimen euxassay_019553_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019553_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019553_13
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019553_13
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019553_13
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_13
TS23: lung Moderate Regionally restricted euxassay_019553_13
Specimen euxassay_019553_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Weak Regionally restricted euxassay_019553_14
TS23: lower jaw incisor Weak Regionally restricted euxassay_019553_14
TS23: telencephalon ventricular layer Weak Uniform euxassay_019553_14
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019553_14
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_019553_14
TS23: hypothalamus ventricular layer Moderate Regionally restricted euxassay_019553_14
TS23: pons ventricular layer Moderate Regionally restricted euxassay_019553_14
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_14
TS23: lung Moderate Regionally restricted euxassay_019553_14
Specimen euxassay_019553_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper jaw incisor Weak Regionally restricted euxassay_019553_15
TS23: lower jaw incisor Weak Regionally restricted euxassay_019553_15
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019553_15
TS23: pons ventricular layer Weak Regionally restricted euxassay_019553_15
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019553_15
TS23: spinal cord ventricular layer Weak Regionally restricted euxassay_019553_15
TS23: lung Weak Regionally restricted euxassay_019553_15
Specimen euxassay_019553_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Weak Regionally restricted euxassay_019553_16
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_16
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019553_16
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019553_16
TS23: pons ventricular layer Weak Regionally restricted euxassay_019553_16
TS23: spinal cord ventricular layer Weak Regionally restricted euxassay_019553_16
TS23: lung Moderate Regionally restricted euxassay_019553_16
Specimen euxassay_019553_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019553_17
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019553_17
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_17
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019553_17
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019553_17
TS23: pons ventricular layer Weak Regionally restricted euxassay_019553_17
TS23: lung Moderate Regionally restricted euxassay_019553_17
TS23: saccule Weak Regionally restricted euxassay_019553_17
Specimen euxassay_019553_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019553_18
TS23: vibrissa Moderate Regionally restricted euxassay_019553_18
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019553_18
TS23: upper jaw molar Weak Regionally restricted euxassay_019553_18
TS23: lower jaw molar Weak Regionally restricted euxassay_019553_18
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_18
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_019553_18
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019553_18
TS23: pons ventricular layer Weak Regionally restricted euxassay_019553_18
TS23: lung Moderate Regionally restricted euxassay_019553_18
TS23: saccule Weak Regionally restricted euxassay_019553_18
Specimen euxassay_019553_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Moderate Regionally restricted euxassay_019553_19
TS23: vibrissa Weak Regionally restricted euxassay_019553_19
TS23: submandibular gland primordium Weak Regionally restricted euxassay_019553_19
TS23: upper jaw molar Weak Regionally restricted euxassay_019553_19
TS23: lower jaw molar Weak Regionally restricted euxassay_019553_19
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_19
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_019553_19
TS23: lung Weak Regionally restricted euxassay_019553_19
TS23: saccule Weak Regionally restricted euxassay_019553_19
Specimen euxassay_019553_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019553_20
TS23: vibrissa Moderate Regionally restricted euxassay_019553_20
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_019553_20
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_20
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_20
TS23: lung Moderate Regionally restricted euxassay_019553_20
TS23: saccule Weak Regionally restricted euxassay_019553_20
Specimen euxassay_019553_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019553_21
TS23: vibrissa Weak Regionally restricted euxassay_019553_21
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_21
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_21
TS23: lung Moderate Regionally restricted euxassay_019553_21
TS23: saccule Weak Regionally restricted euxassay_019553_21
Specimen euxassay_019553_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metanephros Strong Regionally restricted euxassay_019553_22
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_22
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_22
TS23: lung Moderate Regionally restricted euxassay_019553_22
TS23: saccule Weak Regionally restricted euxassay_019553_22
Specimen euxassay_019553_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Uniform euxassay_019553_23
TS23: rest of cerebellum ventricular layer Moderate Regionally restricted euxassay_019553_23
TS23: lung Moderate Regionally restricted euxassay_019553_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory