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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828291
Gene symbol: Slc9a9
Gene name: solute carrier family 9 (sodium/hydrogen exchanger), member 9
Probe: T38012
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_014481_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_02
Specimen euxassay_014481_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_03
TS23: facial ganglion Strong Single cells euxassay_014481_03
TS23: dorsal root ganglion Strong Single cells euxassay_014481_03
Specimen euxassay_014481_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_04
TS23: facial ganglion Strong Single cells euxassay_014481_04
TS23: glossopharyngeal ganglion Strong Single cells euxassay_014481_04
TS23: vestibulo-cochlear ganglion Strong Single cells euxassay_014481_04
TS23: dorsal root ganglion Strong Single cells euxassay_014481_04
Specimen euxassay_014481_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_05
TS23: glossopharyngeal ganglion Strong Single cells euxassay_014481_05
TS23: vestibulo-cochlear ganglion Strong Single cells euxassay_014481_05
TS23: dorsal root ganglion Strong Single cells euxassay_014481_05
Specimen euxassay_014481_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_06
TS23: dorsal root ganglion Strong Single cells euxassay_014481_06
Specimen euxassay_014481_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_07
TS23: dorsal root ganglion Strong Single cells euxassay_014481_07
Specimen euxassay_014481_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Single cells euxassay_014481_08
Specimen euxassay_014481_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Single cells euxassay_014481_09
Specimen euxassay_014481_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Single cells euxassay_014481_10
Specimen euxassay_014481_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Single cells euxassay_014481_11
Specimen euxassay_014481_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Single cells euxassay_014481_12
Specimen euxassay_014481_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Strong Single cells euxassay_014481_13
Specimen euxassay_014481_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Single cells euxassay_014481_14
TS23: dorsal root ganglion Strong Single cells euxassay_014481_14
Specimen euxassay_014481_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Single cells euxassay_014481_15
TS23: vestibulo-cochlear ganglion Strong Single cells euxassay_014481_15
TS23: trigeminal ganglion Strong Single cells euxassay_014481_15
TS23: dorsal root ganglion Strong Single cells euxassay_014481_15
Specimen euxassay_014481_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_16
TS23: dorsal root ganglion Strong Single cells euxassay_014481_16
Specimen euxassay_014481_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_17
TS23: facial ganglion Strong Single cells euxassay_014481_17
Specimen euxassay_014481_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_18
TS23: facial ganglion Strong Single cells euxassay_014481_18
Specimen euxassay_014481_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_19
Specimen euxassay_014481_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Single cells euxassay_014481_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory