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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828226
Gene symbol: Slc39a8
Gene name: solute carrier family 39 (metal ion transporter), member 8
Probe: IMAGE clone 2099925
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: blood vessel Strong Regionally restricted Expression is present in the vasculature of the brain.
TS23: choroid plexus Weak
TS23: brain meninges Strong
Specimen euxassay_011277_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_01
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_01
TS23: brain Strong Spotted euxassay_011277_01
Specimen euxassay_011277_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_02
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_02
TS23: brain Strong Spotted euxassay_011277_02
Specimen euxassay_011277_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_03
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_03
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_03
TS23: brain Strong Spotted euxassay_011277_03
TS23: lung Moderate Regionally restricted euxassay_011277_03
Specimen euxassay_011277_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_04
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_04
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_04
TS23: brain Strong Spotted euxassay_011277_04
TS23: lung Moderate Regionally restricted euxassay_011277_04
Specimen euxassay_011277_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_05
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_05
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_05
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_05
TS23: brain Strong Spotted euxassay_011277_05
TS23: vibrissa Strong Regionally restricted euxassay_011277_05
TS23: lung Moderate Regionally restricted euxassay_011277_05
TS23: cochlea Moderate Regionally restricted euxassay_011277_05
TS23: saccule Moderate Regionally restricted euxassay_011277_05
TS23: urinary system Moderate Regionally restricted euxassay_011277_05
TS23: mesonephros Present euxassay_011277_05
Specimen euxassay_011277_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_06
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_06
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_06
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_06
TS23: brain Strong Spotted euxassay_011277_06
TS23: vibrissa Strong Regionally restricted euxassay_011277_06
TS23: lung Moderate Regionally restricted euxassay_011277_06
TS23: cochlea Moderate Regionally restricted euxassay_011277_06
TS23: saccule Moderate Regionally restricted euxassay_011277_06
Specimen euxassay_011277_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_07
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_07
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_07
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_07
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_07
TS23: brain Strong Spotted euxassay_011277_07
TS23: vibrissa Strong Regionally restricted euxassay_011277_07
TS23: lung Moderate Regionally restricted euxassay_011277_07
TS23: cochlea Moderate Regionally restricted euxassay_011277_07
TS23: midgut Weak Regionally restricted euxassay_011277_07
Specimen euxassay_011277_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_08
TS23: spinal cord meninges Strong Regionally restricted euxassay_011277_08
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_08
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_08
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_08
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_08
TS23: brain Strong Spotted euxassay_011277_08
TS23: spinal cord Strong Spotted euxassay_011277_08
TS23: lung Moderate Regionally restricted euxassay_011277_08
TS23: cochlea Moderate Regionally restricted euxassay_011277_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011277_08
TS23: maturing glomerular tuft Moderate Regionally restricted euxassay_011277_08
TS23: midgut Weak Regionally restricted euxassay_011277_08
Specimen euxassay_011277_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_09
TS23: spinal cord meninges Strong Regionally restricted euxassay_011277_09
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_09
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_09
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_09
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_09
TS23: brain Strong Spotted euxassay_011277_09
TS23: spinal cord Strong Spotted euxassay_011277_09
TS23: lung Moderate Regionally restricted euxassay_011277_09
TS23: cochlea Moderate Regionally restricted euxassay_011277_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011277_09
TS23: maturing glomerular tuft Moderate Regionally restricted euxassay_011277_09
TS23: midgut Weak Regionally restricted euxassay_011277_09
Specimen euxassay_011277_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_10
TS23: spinal cord meninges Strong Regionally restricted euxassay_011277_10
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_10
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_10
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_10
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_10
TS23: brain Strong Spotted euxassay_011277_10
TS23: spinal cord Strong Spotted euxassay_011277_10
TS23: lung Moderate Regionally restricted euxassay_011277_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_011277_10
TS23: midgut Weak Regionally restricted euxassay_011277_10
Specimen euxassay_011277_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_11
TS23: spinal cord meninges Strong Regionally restricted euxassay_011277_11
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_11
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_11
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_11
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_11
TS23: brain Strong Spotted euxassay_011277_11
TS23: spinal cord Strong Spotted euxassay_011277_11
TS23: lung Moderate Regionally restricted euxassay_011277_11
TS23: thymus primordium Moderate Regionally restricted euxassay_011277_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_011277_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_011277_11
TS23: midgut Weak Regionally restricted euxassay_011277_11
Specimen euxassay_011277_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_12
TS23: spinal cord meninges Strong Regionally restricted euxassay_011277_12
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_12
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_12
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_12
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_12
TS23: brain Strong Spotted euxassay_011277_12
TS23: spinal cord Strong Spotted euxassay_011277_12
TS23: lung Moderate Regionally restricted euxassay_011277_12
TS23: thymus primordium Moderate Regionally restricted euxassay_011277_12
TS23: lower jaw incisor Strong Regionally restricted euxassay_011277_12
TS23: midgut Weak Regionally restricted euxassay_011277_12
Specimen euxassay_011277_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_13
TS23: spinal cord meninges Strong Regionally restricted euxassay_011277_13
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_13
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_13
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_13
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_13
TS23: brain Strong Spotted euxassay_011277_13
TS23: spinal cord Strong Spotted euxassay_011277_13
TS23: lung Moderate Regionally restricted euxassay_011277_13
TS23: thymus primordium Moderate Regionally restricted euxassay_011277_13
TS23: midgut Moderate Regionally restricted euxassay_011277_13
Specimen euxassay_011277_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_14
TS23: spinal cord meninges Strong Regionally restricted euxassay_011277_14
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_14
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_14
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_14
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_14
TS23: brain Strong Spotted euxassay_011277_14
TS23: spinal cord Strong Spotted euxassay_011277_14
TS23: lung Moderate Regionally restricted euxassay_011277_14
TS23: thymus primordium Moderate Regionally restricted euxassay_011277_14
TS23: midgut Moderate Regionally restricted euxassay_011277_14
Specimen euxassay_011277_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_15
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_15
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_15
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_15
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_15
TS23: spinal cord meninges Strong Regionally restricted euxassay_011277_15
TS23: brain Strong Spotted euxassay_011277_15
TS23: spinal cord Strong Spotted euxassay_011277_15
TS23: lung Moderate Regionally restricted euxassay_011277_15
TS23: thymus primordium Moderate Regionally restricted euxassay_011277_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_011277_15
TS23: midgut Moderate Regionally restricted euxassay_011277_15
Specimen euxassay_011277_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_16
TS23: spinal cord meninges Strong Regionally restricted euxassay_011277_16
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_16
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_16
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_16
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_16
TS23: brain Strong Spotted euxassay_011277_16
TS23: spinal cord Strong Spotted euxassay_011277_16
TS23: lung Moderate Regionally restricted euxassay_011277_16
TS23: cochlea Moderate Regionally restricted euxassay_011277_16
TS23: upper jaw incisor Strong Regionally restricted euxassay_011277_16
TS23: midgut Moderate Regionally restricted euxassay_011277_16
Specimen euxassay_011277_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_17
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_17
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_17
TS23: diencephalon meninges Strong Regionally restricted euxassay_011277_17
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_17
TS23: brain Strong Spotted euxassay_011277_17
TS23: lung Moderate Regionally restricted euxassay_011277_17
TS23: cochlea Moderate Regionally restricted euxassay_011277_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011277_17
TS23: maturing glomerular tuft Weak Regionally restricted euxassay_011277_17
Specimen euxassay_011277_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_18
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_18
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_18
TS23: midbrain meninges Strong Regionally restricted euxassay_011277_18
TS23: brain Strong Spotted euxassay_011277_18
TS23: lung Moderate Regionally restricted euxassay_011277_18
TS23: cochlea Moderate Regionally restricted euxassay_011277_18
TS23: saccule Moderate Regionally restricted euxassay_011277_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_011277_18
TS23: maturing glomerular tuft Moderate Regionally restricted euxassay_011277_18
Specimen euxassay_011277_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_19
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_19
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_19
TS23: brain Strong Spotted euxassay_011277_19
TS23: lung Moderate Regionally restricted euxassay_011277_19
TS23: cochlea Moderate Regionally restricted euxassay_011277_19
TS23: olfactory epithelium Weak Regionally restricted euxassay_011277_19
TS23: maturing glomerular tuft Moderate Regionally restricted euxassay_011277_19
Specimen euxassay_011277_20: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_20
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_20
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_20
TS23: brain Strong Spotted euxassay_011277_20
TS23: lung Moderate Regionally restricted euxassay_011277_20
TS23: urinary system Moderate Regionally restricted euxassay_011277_20
TS23: mesonephros Present euxassay_011277_20
Specimen euxassay_011277_21: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_21
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_21
TS23: hindbrain meninges Strong Regionally restricted euxassay_011277_21
TS23: brain Strong Spotted euxassay_011277_21
TS23: vibrissa Strong Regionally restricted euxassay_011277_21
TS23: lung Moderate Regionally restricted euxassay_011277_21
TS23: urinary system Moderate Regionally restricted euxassay_011277_21
TS23: mesonephros Present euxassay_011277_21
Specimen euxassay_011277_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_22
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_22
TS23: brain Strong Spotted euxassay_011277_22
TS23: vibrissa Strong Regionally restricted euxassay_011277_22
TS23: lung Moderate Regionally restricted euxassay_011277_22
Specimen euxassay_011277_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver lobe Strong Regionally restricted euxassay_011277_23
TS23: telencephalon meninges Strong Regionally restricted euxassay_011277_23
TS23: brain Strong Spotted euxassay_011277_23
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory