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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828119
Gene symbol: Slc17a6
Gene name: solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6
Probe: MGC clone 36456
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen S4: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Present Widespread S4F E14.5 Expression is present in synaptic vesicles and thus is broadly expressed in neurons in the brain.

Specimen Table S6: embryonic day 14.5 (more )
Note: The probe used to generate this data was not specified; another gene-specific probe may have been used.
Structure Level Pattern Image Note
TS23: cerebral cortex Strong
TS23: thalamus Strong
TS23: hypothalamus Strong
TS23: midbrain Strong
TS23: medulla oblongata Strong
TS23: pons Strong

Specimen euxassay_004371_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_01
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_01
TS23: neural retina Strong Regionally restricted euxassay_004371_01

Specimen euxassay_004371_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_02
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_02
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_02
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_02
TS23: neural retina Strong Regionally restricted euxassay_004371_02

Specimen euxassay_004371_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_03
TS23: facial ganglion Strong Regionally restricted euxassay_004371_03
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_03
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_03
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_03

Specimen euxassay_004371_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_04
TS23: facial ganglion Strong Regionally restricted euxassay_004371_04
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_04
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_04
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_04
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_04

Specimen euxassay_004371_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004371_05
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_05
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_05
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_05
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_05
TS23: midbrain mantle layer Strong Uniform euxassay_004371_05

Specimen euxassay_004371_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_004371_06
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004371_06
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_06
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_06
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_06
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_06
TS23: midbrain mantle layer Strong Uniform euxassay_004371_06
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_06
TS23: thalamus Present euxassay_004371_06
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_06
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_06
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004371_06
TS23: olfactory epithelium Moderate Single cells euxassay_004371_06

Specimen euxassay_004371_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_07
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004371_07
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_004371_07
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004371_07
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_07
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_07
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_07
TS23: midbrain mantle layer Strong Uniform euxassay_004371_07
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_07
TS23: thalamus Present euxassay_004371_07
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004371_07
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_07
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_07
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004371_07
TS23: olfactory epithelium Moderate Single cells euxassay_004371_07

Specimen euxassay_004371_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_08
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_08
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004371_08
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_08
TS23: midbrain mantle layer Strong Uniform euxassay_004371_08
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_08
TS23: thalamus Present euxassay_004371_08
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004371_08
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_08
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_08
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004371_08
TS23: olfactory epithelium Moderate Single cells euxassay_004371_08

Specimen euxassay_004371_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004371_09
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_09
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_09
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_09
TS23: midbrain mantle layer Strong Uniform euxassay_004371_09
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_09
TS23: thalamus Present euxassay_004371_09
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004371_09
TS23: spinal cord Strong Uniform euxassay_004371_09
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_09
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_09
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004371_09
TS23: olfactory epithelium Moderate Single cells euxassay_004371_09
TS23: tail mesenchyme Moderate Regionally restricted euxassay_004371_09

Specimen euxassay_004371_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_10
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004371_10
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_10
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_10
TS23: midbrain mantle layer Strong Uniform euxassay_004371_10
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_10
TS23: thalamus Present euxassay_004371_10
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004371_10
TS23: spinal cord Strong Uniform euxassay_004371_10
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_10
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_10
TS23: olfactory epithelium Moderate Single cells euxassay_004371_10
TS23: tail mesenchyme Moderate Regionally restricted euxassay_004371_10

Specimen euxassay_004371_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_11
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_11
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_11
TS23: midbrain mantle layer Strong Uniform euxassay_004371_11
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_11
TS23: thalamus Present euxassay_004371_11
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004371_11
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_11
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_11
TS23: spinal cord Strong Uniform euxassay_004371_11
TS23: olfactory epithelium Moderate Single cells euxassay_004371_11
TS23: tail mesenchyme Moderate Regionally restricted euxassay_004371_11

Specimen euxassay_004371_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_12
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_12
TS23: midbrain mantle layer Strong Uniform euxassay_004371_12
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_12
TS23: thalamus Present euxassay_004371_12
TS23: spinal cord Strong Uniform euxassay_004371_12
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_12
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_12

Specimen euxassay_004371_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004371_13
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_13
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_13
TS23: midbrain mantle layer Strong Uniform euxassay_004371_13
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_13
TS23: thalamus Present euxassay_004371_13
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004371_13
TS23: spinal cord Strong Uniform euxassay_004371_13
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_13
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_13
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004371_13
TS23: olfactory epithelium Moderate Single cells euxassay_004371_13
TS23: tail mesenchyme Moderate Regionally restricted euxassay_004371_13

Specimen euxassay_004371_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_14
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004371_14
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_14
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_14
TS23: midbrain mantle layer Strong Uniform euxassay_004371_14
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_14
TS23: thalamus Present euxassay_004371_14
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004371_14
TS23: spinal cord Strong Uniform euxassay_004371_14
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_14
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_14
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004371_14
TS23: olfactory epithelium Moderate Single cells euxassay_004371_14
TS23: tail mesenchyme Moderate Regionally restricted euxassay_004371_14

Specimen euxassay_004371_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004371_15
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_15
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_15
TS23: midbrain mantle layer Strong Uniform euxassay_004371_15
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_15
TS23: thalamus Present euxassay_004371_15
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004371_15
TS23: spinal cord Strong Uniform euxassay_004371_15
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_15
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_15
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004371_15
TS23: olfactory epithelium Weak Single cells euxassay_004371_15
TS23: tail mesenchyme Moderate Regionally restricted euxassay_004371_15

Specimen euxassay_004371_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_16
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_16
TS23: olfactory cortex marginal layer Strong Regionally restricted euxassay_004371_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_16
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_16
TS23: midbrain mantle layer Strong Uniform euxassay_004371_16
TS23: pretectum Present euxassay_004371_16
TS23: thalamus Present euxassay_004371_16
TS23: diencephalon lateral wall mantle layer Strong Regionally restricted euxassay_004371_16
TS23: hypothalamus mantle layer Strong Regionally restricted euxassay_004371_16
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_16
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_16
TS23: spinal cord Strong Uniform euxassay_004371_16
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004371_16
TS23: olfactory epithelium Weak Single cells euxassay_004371_16

Specimen euxassay_004371_17: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: vagus ganglion Strong Regionally restricted euxassay_004371_17
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_17
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_004371_17
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004371_17
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_17
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_17
TS23: midbrain mantle layer Strong Uniform euxassay_004371_17
TS23: diencephalon lateral wall mantle layer Strong Uniform euxassay_004371_17
TS23: thalamus Present euxassay_004371_17
TS23: hypothalamus mantle layer Strong Uniform euxassay_004371_17
TS23: medulla oblongata basal plate mantle layer Strong Uniform euxassay_004371_17
TS23: medulla oblongata alar plate mantle layer Strong Uniform euxassay_004371_17
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004371_17
TS23: olfactory epithelium Weak Single cells euxassay_004371_17

Specimen euxassay_004371_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: glossopharyngeal ganglion Strong Regionally restricted euxassay_004371_18
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004371_18
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_18
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_18
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_18
TS23: midbrain mantle layer Strong Uniform euxassay_004371_18
TS23: dorsal root ganglion Strong Regionally restricted euxassay_004371_18

Specimen euxassay_004371_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_19
TS23: vestibulo-cochlear ganglion Strong Regionally restricted euxassay_004371_19
TS23: facial ganglion Strong Regionally restricted euxassay_004371_19
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_19
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_19
TS23: midbrain mantle layer Strong Uniform euxassay_004371_19

Specimen euxassay_004371_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_20
TS23: facial ganglion Strong Regionally restricted euxassay_004371_20
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_20
TS23: pons mantle layer Strong Regionally restricted euxassay_004371_20
TS23: midbrain mantle layer Strong Uniform euxassay_004371_20

Specimen euxassay_004371_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Strong Regionally restricted euxassay_004371_21
TS23: facial ganglion Strong Regionally restricted euxassay_004371_21
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_21
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_004371_21
TS23: neural retina Strong Regionally restricted euxassay_004371_21

Specimen euxassay_004371_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_22
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_22
TS23: neural retina Strong Regionally restricted euxassay_004371_22

Specimen euxassay_004371_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_23
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_23
TS23: neural retina Moderate Regionally restricted euxassay_004371_23

Specimen euxassay_004371_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon marginal layer Strong Regionally restricted euxassay_004371_24
TS23: telencephalon mantle layer Strong Regionally restricted euxassay_004371_24
TS23: neural retina Moderate Regionally restricted euxassay_004371_24


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
05/14/2024
MGI 6.23
The Jackson Laboratory