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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828072
Gene symbol: Sik1
Gene name: salt inducible kinase 1
Probe: IMAGE clone 1890289
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_006258_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_01
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_01
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006258_01
TS23: diaphragm Moderate Regionally restricted euxassay_006258_01
TS23: epidermis Moderate Regionally restricted euxassay_006258_01
Specimen euxassay_006258_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_02
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_02
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006258_02
TS23: diaphragm Moderate Regionally restricted euxassay_006258_02
TS23: epidermis Moderate Regionally restricted euxassay_006258_02
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_006258_02
Specimen euxassay_006258_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_03
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_03
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006258_03
TS23: diaphragm Moderate Regionally restricted euxassay_006258_03
TS23: epidermis Moderate Regionally restricted euxassay_006258_03
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_006258_03
Specimen euxassay_006258_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_04
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_04
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006258_04
TS23: diaphragm Moderate Regionally restricted euxassay_006258_04
TS23: epidermis Moderate Regionally restricted euxassay_006258_04
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_04
Specimen euxassay_006258_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_05
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_05
TS23: diaphragm Moderate Regionally restricted euxassay_006258_05
TS23: epidermis Moderate Regionally restricted euxassay_006258_05
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_05
Specimen euxassay_006258_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_06
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_06
TS23: diaphragm Moderate Regionally restricted euxassay_006258_06
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006258_06
TS23: epidermis Moderate Regionally restricted euxassay_006258_06
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_06
Specimen euxassay_006258_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_07
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_07
TS23: diaphragm Moderate Regionally restricted euxassay_006258_07
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006258_07
TS23: epidermis Moderate Regionally restricted euxassay_006258_07
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_07
Specimen euxassay_006258_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_08
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_08
TS23: diaphragm Moderate Regionally restricted euxassay_006258_08
TS23: tongue muscle Moderate Regionally restricted euxassay_006258_08
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006258_08
TS23: epidermis Moderate Regionally restricted euxassay_006258_08
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_08
Specimen euxassay_006258_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_09
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_09
TS23: tongue muscle Moderate Regionally restricted euxassay_006258_09
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006258_09
TS23: epidermis Moderate Regionally restricted euxassay_006258_09
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_09
Specimen euxassay_006258_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_10
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_10
TS23: tongue muscle Moderate Regionally restricted euxassay_006258_10
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_006258_10
TS23: naris Moderate Regionally restricted euxassay_006258_10
TS23: thymus primordium Weak Regionally restricted euxassay_006258_10
TS23: epidermis Moderate Regionally restricted euxassay_006258_10
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_10
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006258_10
Specimen euxassay_006258_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_11
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_11
TS23: tongue muscle Moderate Regionally restricted euxassay_006258_11
TS23: esophagus Strong Regionally restricted euxassay_006258_11
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_006258_11
TS23: thymus primordium Weak Regionally restricted euxassay_006258_11
TS23: epidermis Moderate Regionally restricted euxassay_006258_11
TS23: tail mesenchyme Moderate Regionally restricted euxassay_006258_11
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_11
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006258_11
Specimen euxassay_006258_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tongue muscle Moderate Regionally restricted euxassay_006258_12
TS23: esophagus Strong Regionally restricted euxassay_006258_12
TS23: trachea Weak Regionally restricted euxassay_006258_12
TS23: thymus primordium Weak Regionally restricted euxassay_006258_12
TS23: epidermis Moderate Regionally restricted euxassay_006258_12
TS23: tail mesenchyme Moderate Regionally restricted euxassay_006258_12
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_12
TS23: epithalamus mantle layer Weak Regionally restricted euxassay_006258_12
Specimen euxassay_006258_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_13
TS23: tongue muscle Moderate Regionally restricted euxassay_006258_13
TS23: naris Moderate Regionally restricted euxassay_006258_13
TS23: trachea Weak Regionally restricted euxassay_006258_13
TS23: thymus primordium Weak Regionally restricted euxassay_006258_13
TS23: urethra Strong Regionally restricted euxassay_006258_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: epidermis Moderate Regionally restricted euxassay_006258_13
TS23: tail mesenchyme Moderate Regionally restricted euxassay_006258_13
TS23: epithalamus mantle layer Moderate Regionally restricted euxassay_006258_13
Specimen euxassay_006258_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_14
TS23: tongue muscle Moderate Regionally restricted euxassay_006258_14
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_006258_14
TS23: naris Moderate Regionally restricted euxassay_006258_14
TS23: thymus primordium Weak Regionally restricted euxassay_006258_14
TS23: epidermis Moderate Regionally restricted euxassay_006258_14
TS23: tail mesenchyme Moderate Regionally restricted euxassay_006258_14
Specimen euxassay_006258_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_15
TS23: nasal cavity respiratory epithelium Moderate Regionally restricted euxassay_006258_15
TS23: epidermis Moderate Regionally restricted euxassay_006258_15
TS23: tail mesenchyme Moderate Regionally restricted euxassay_006258_15
TS23: epithalamus mantle layer Moderate Regionally restricted euxassay_006258_15
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006258_15
Specimen euxassay_006258_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_16
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_16
TS23: diaphragm Moderate Regionally restricted euxassay_006258_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006258_16
TS23: epidermis Moderate Regionally restricted euxassay_006258_16
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_16
TS23: rest of cerebellum mantle layer Moderate Regionally restricted euxassay_006258_16
Specimen euxassay_006258_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_17
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_17
TS23: diaphragm Moderate Regionally restricted euxassay_006258_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006258_17
TS23: epidermis Moderate Regionally restricted euxassay_006258_17
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_006258_17
Specimen euxassay_006258_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_18
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_18
TS23: diaphragm Moderate Regionally restricted euxassay_006258_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_006258_18
TS23: epidermis Moderate Regionally restricted euxassay_006258_18
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_18
Specimen euxassay_006258_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_19
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_19
TS23: diaphragm Moderate Regionally restricted euxassay_006258_19
TS23: epidermis Moderate Regionally restricted euxassay_006258_19
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_19
Specimen euxassay_006258_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_20
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_20
TS23: diaphragm Moderate Regionally restricted euxassay_006258_20
TS23: epidermis Moderate Regionally restricted euxassay_006258_20
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_20
Specimen euxassay_006258_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_21
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_21
TS23: diaphragm Moderate Regionally restricted euxassay_006258_21
TS23: epidermis Moderate Regionally restricted euxassay_006258_21
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_21
Specimen euxassay_006258_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_22
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_22
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006258_22
TS23: diaphragm Moderate Regionally restricted euxassay_006258_22
TS23: epidermis Moderate Regionally restricted euxassay_006258_22
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_22
Specimen euxassay_006258_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_23
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_23
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006258_23
TS23: diaphragm Moderate Regionally restricted euxassay_006258_23
TS23: epidermis Moderate Regionally restricted euxassay_006258_23
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_23
Specimen euxassay_006258_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vertebral axis musculature Strong Regionally restricted euxassay_006258_24
TS23: head mesenchyme Strong Regionally restricted euxassay_006258_24
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_006258_24
TS23: diaphragm Moderate Regionally restricted euxassay_006258_24
TS23: epidermis Moderate Regionally restricted euxassay_006258_24
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_006258_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory