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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827948
Gene symbol: Sema4g
Gene name: sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
Probe: IMAGE clone 1547597
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_007828_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_01
TS23: neural retina Weak Regionally restricted euxassay_007828_01
TS23: forebrain Moderate Uniform euxassay_007828_01
Specimen euxassay_007828_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_02
TS23: neural retina Moderate Regionally restricted euxassay_007828_02
TS23: forebrain Moderate Uniform euxassay_007828_02
Specimen euxassay_007828_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_03
TS23: neural retina Moderate Regionally restricted euxassay_007828_03
TS23: forebrain Moderate Uniform euxassay_007828_03
Specimen euxassay_007828_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_04
TS23: midgut loop Moderate Regionally restricted euxassay_007828_04
TS23: forebrain Moderate Uniform euxassay_007828_04
TS23: hindbrain Moderate Uniform euxassay_007828_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_04
TS23: vibrissa Weak Regionally restricted euxassay_007828_04
Specimen euxassay_007828_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_05
TS23: midgut loop Moderate Regionally restricted euxassay_007828_05
TS23: forebrain Moderate Uniform euxassay_007828_05
TS23: hindbrain Moderate Uniform euxassay_007828_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_05
TS23: vibrissa Weak Regionally restricted euxassay_007828_05
TS23: renal cortex Moderate Regionally restricted euxassay_007828_05
Specimen euxassay_007828_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_06
TS23: midgut loop Moderate Regionally restricted euxassay_007828_06
TS23: forebrain Moderate Uniform euxassay_007828_06
TS23: hindbrain Moderate Uniform euxassay_007828_06
TS23: midbrain Moderate Uniform euxassay_007828_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_06
TS23: vibrissa Weak Regionally restricted euxassay_007828_06
TS23: renal cortex Weak Regionally restricted euxassay_007828_06
Specimen euxassay_007828_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_07
TS23: midgut loop Moderate Regionally restricted euxassay_007828_07
TS23: forebrain Moderate Uniform euxassay_007828_07
TS23: hindbrain Moderate Uniform euxassay_007828_07
TS23: midbrain Moderate Uniform euxassay_007828_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_07
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007828_07
TS23: vibrissa Weak Regionally restricted euxassay_007828_07
TS23: renal cortex Weak Regionally restricted euxassay_007828_07
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007828_07
Specimen euxassay_007828_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_08
TS23: midgut loop Moderate Regionally restricted euxassay_007828_08
TS23: forebrain Moderate Uniform euxassay_007828_08
TS23: hindbrain Moderate Uniform euxassay_007828_08
TS23: midbrain Moderate Uniform euxassay_007828_08
TS23: spinal cord Moderate Uniform euxassay_007828_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_08
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007828_08
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007828_08
TS23: renal cortex Weak Regionally restricted euxassay_007828_08
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007828_08
TS23: olfactory epithelium Weak Regionally restricted euxassay_007828_08
Specimen euxassay_007828_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_09
TS23: midgut loop Moderate Regionally restricted euxassay_007828_09
TS23: forebrain Moderate Uniform euxassay_007828_09
TS23: hindbrain Moderate Uniform euxassay_007828_09
TS23: midbrain Moderate Uniform euxassay_007828_09
TS23: spinal cord Moderate Uniform euxassay_007828_09
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_09
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007828_09
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007828_09
TS23: renal cortex Weak Regionally restricted euxassay_007828_09
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007828_09
TS23: olfactory epithelium Weak Regionally restricted euxassay_007828_09
Specimen euxassay_007828_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_10
TS23: midgut loop Moderate Regionally restricted euxassay_007828_10
TS23: forebrain Moderate Uniform euxassay_007828_10
TS23: hindbrain Moderate Uniform euxassay_007828_10
TS23: midbrain Moderate Uniform euxassay_007828_10
TS23: spinal cord Moderate Uniform euxassay_007828_10
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007828_10
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007828_10
TS23: olfactory epithelium Weak Regionally restricted euxassay_007828_10
TS23: cervical ganglion Weak Regionally restricted euxassay_007828_10
Specimen euxassay_007828_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver left lobe Moderate Single cells euxassay_007828_11
TS23: midgut loop Moderate Regionally restricted euxassay_007828_11
TS23: rectum Moderate Regionally restricted euxassay_007828_11
TS23: forebrain Moderate Uniform euxassay_007828_11
TS23: hindbrain Moderate Uniform euxassay_007828_11
TS23: midbrain Moderate Uniform euxassay_007828_11
TS23: spinal cord Moderate Uniform euxassay_007828_11
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007828_11
TS23: bladder fundus Strong Regionally restricted euxassay_007828_11
TS23: urethra Strong Regionally restricted euxassay_007828_11 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: olfactory epithelium Weak Regionally restricted euxassay_007828_11
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_007828_11
Specimen euxassay_007828_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_12
TS23: midgut loop Moderate Regionally restricted euxassay_007828_12
TS23: hindgut Moderate Regionally restricted euxassay_007828_12
TS23: forebrain Moderate Uniform euxassay_007828_12
TS23: hindbrain Moderate Uniform euxassay_007828_12
TS23: midbrain Moderate Uniform euxassay_007828_12
TS23: spinal cord Moderate Uniform euxassay_007828_12
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007828_12
TS23: bladder fundus Strong Regionally restricted euxassay_007828_12
TS23: urethra Strong Regionally restricted euxassay_007828_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-sex specific term.
TS23: olfactory epithelium Weak Regionally restricted euxassay_007828_12
Specimen euxassay_007828_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_13
TS23: midgut loop Moderate Regionally restricted euxassay_007828_13
TS23: hindgut Moderate Regionally restricted euxassay_007828_13
TS23: forebrain Moderate Uniform euxassay_007828_13
TS23: hindbrain Moderate Uniform euxassay_007828_13
TS23: midbrain Moderate Uniform euxassay_007828_13
TS23: spinal cord Moderate Uniform euxassay_007828_13
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007828_13
TS23: bladder fundus Strong Regionally restricted euxassay_007828_13
Specimen euxassay_007828_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_14
TS23: hindgut Moderate Regionally restricted euxassay_007828_14
TS23: forebrain Moderate Uniform euxassay_007828_14
TS23: hindbrain Moderate Uniform euxassay_007828_14
TS23: midbrain Moderate Uniform euxassay_007828_14
TS23: spinal cord Moderate Uniform euxassay_007828_14
TS23: renal cortex Weak Regionally restricted euxassay_007828_14
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007828_14
TS23: olfactory epithelium Weak Regionally restricted euxassay_007828_14
Specimen euxassay_007828_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_15
TS23: hindgut Moderate Regionally restricted euxassay_007828_15
TS23: forebrain Moderate Uniform euxassay_007828_15
TS23: hindbrain Moderate Uniform euxassay_007828_15
TS23: midbrain Moderate Uniform euxassay_007828_15
TS23: spinal cord Moderate Uniform euxassay_007828_15
TS23: renal cortex Weak Regionally restricted euxassay_007828_15
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007828_15
TS23: olfactory epithelium Moderate Regionally restricted euxassay_007828_15
Specimen euxassay_007828_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_16
TS23: hindgut Moderate Regionally restricted euxassay_007828_16
TS23: spinal cord Moderate Uniform euxassay_007828_16
TS23: midbrain Moderate Uniform euxassay_007828_16
TS23: hindbrain Moderate Uniform euxassay_007828_16
TS23: forebrain Moderate Uniform euxassay_007828_16
TS23: renal cortex Weak Regionally restricted euxassay_007828_16
TS23: dorsal root ganglion Weak Regionally restricted euxassay_007828_16
TS23: olfactory epithelium Weak Regionally restricted euxassay_007828_16
Specimen euxassay_007828_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_17
TS23: hindgut Moderate Regionally restricted euxassay_007828_17
TS23: forebrain Moderate Uniform euxassay_007828_17
TS23: hindbrain Moderate Uniform euxassay_007828_17
TS23: midbrain Moderate Uniform euxassay_007828_17
TS23: spinal cord Moderate Uniform euxassay_007828_17
TS23: trigeminal nerve Moderate Regionally restricted euxassay_007828_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_17
TS23: renal cortex Weak Regionally restricted euxassay_007828_17
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007828_17
TS23: olfactory epithelium Weak Regionally restricted euxassay_007828_17
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_007828_17
Specimen euxassay_007828_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_18
TS23: forebrain Moderate Uniform euxassay_007828_18
TS23: hindbrain Moderate Uniform euxassay_007828_18
TS23: midbrain Moderate Uniform euxassay_007828_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007828_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007828_18
TS23: renal cortex Weak Regionally restricted euxassay_007828_18
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007828_18
TS23: olfactory epithelium Weak Regionally restricted euxassay_007828_18
TS23: cervical ganglion Weak Regionally restricted euxassay_007828_18
Specimen euxassay_007828_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_19
TS23: forebrain Moderate Uniform euxassay_007828_19
TS23: hindbrain Moderate Uniform euxassay_007828_19
TS23: midbrain Moderate Uniform euxassay_007828_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_19
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007828_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007828_19
TS23: vibrissa Weak Regionally restricted euxassay_007828_19
TS23: dorsal root ganglion Moderate Regionally restricted euxassay_007828_19
Specimen euxassay_007828_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_20
TS23: forebrain Moderate Uniform euxassay_007828_20
TS23: hindbrain Moderate Uniform euxassay_007828_20
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_007828_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_007828_20
TS23: vibrissa Weak Regionally restricted euxassay_007828_20
Specimen euxassay_007828_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_21
TS23: forebrain Moderate Uniform euxassay_007828_21
TS23: hindbrain Moderate Uniform euxassay_007828_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_007828_21
TS23: vibrissa Weak Regionally restricted euxassay_007828_21
Specimen euxassay_007828_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_22
TS23: neural retina Weak Regionally restricted euxassay_007828_22
TS23: forebrain Moderate Uniform euxassay_007828_22
TS23: trigeminal ganglion Weak Regionally restricted euxassay_007828_22
TS23: vibrissa Weak Regionally restricted euxassay_007828_22
Specimen euxassay_007828_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_23
TS23: neural retina Moderate Regionally restricted euxassay_007828_23
TS23: forebrain Moderate Uniform euxassay_007828_23
TS23: vibrissa Weak Regionally restricted euxassay_007828_23
Specimen euxassay_007828_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: liver right lobe Moderate Single cells euxassay_007828_24
TS23: neural retina Moderate Regionally restricted euxassay_007828_24
TS23: forebrain Moderate Uniform euxassay_007828_24
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/25/2025
MGI 6.24 		The Jackson Laboratory