About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827877
Gene symbol: Satb2
Gene name: special AT-rich sequence binding protein 2
Probe: T35531
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_005801_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_01
TS23: orbito-sphenoid Strong Regionally restricted euxassay_005801_01
TS23: elbow mesenchyme Strong Regionally restricted euxassay_005801_01
TS23: humerus Strong Regionally restricted euxassay_005801_01
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_01
TS23: shoulder Strong Regionally restricted euxassay_005801_01
Specimen euxassay_005801_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_02
TS23: orbito-sphenoid Strong Regionally restricted euxassay_005801_02
TS23: humerus Strong Regionally restricted euxassay_005801_02
TS23: elbow mesenchyme Strong Regionally restricted euxassay_005801_02
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_02
TS23: shoulder Strong Regionally restricted euxassay_005801_02
Specimen euxassay_005801_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_03
TS23: orbito-sphenoid Strong Regionally restricted euxassay_005801_03
TS23: mandible Strong Regionally restricted euxassay_005801_03
TS23: humerus Strong Regionally restricted euxassay_005801_03
TS23: knee mesenchyme Strong Regionally restricted euxassay_005801_03
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_03
TS23: shoulder Strong Regionally restricted euxassay_005801_03
Specimen euxassay_005801_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_04
TS23: orbito-sphenoid Strong Regionally restricted euxassay_005801_04
TS23: mandible Strong Regionally restricted euxassay_005801_04
TS23: knee mesenchyme Strong Regionally restricted euxassay_005801_04
TS23: femur Strong Regionally restricted euxassay_005801_04
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_04
Specimen euxassay_005801_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_05
TS23: orbito-sphenoid Strong Regionally restricted euxassay_005801_05
TS23: mandible Strong Regionally restricted euxassay_005801_05
TS23: maxilla Strong Regionally restricted euxassay_005801_05
TS23: femur Strong Regionally restricted euxassay_005801_05
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_05
Specimen euxassay_005801_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_06
TS23: orbito-sphenoid Strong Regionally restricted euxassay_005801_06
TS23: mandible Strong Regionally restricted euxassay_005801_06
TS23: maxilla Strong Regionally restricted euxassay_005801_06
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_06
TS23: clavicle Strong Regionally restricted euxassay_005801_06
Specimen euxassay_005801_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Strong Regionally restricted euxassay_005801_07
TS23: maxilla Strong Regionally restricted euxassay_005801_07
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_07
TS23: clavicle Strong Regionally restricted euxassay_005801_07
Specimen euxassay_005801_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_005801_08
TS23: mandible Strong Regionally restricted euxassay_005801_08
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_005801_08
TS23: clavicle Strong Regionally restricted euxassay_005801_08
TS23: hypothalamus mantle layer Weak Single cells euxassay_005801_08
Specimen euxassay_005801_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_005801_09
TS23: mandible Strong Regionally restricted euxassay_005801_09
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_005801_09
TS23: hypothalamus mantle layer Moderate Single cells euxassay_005801_09
Specimen euxassay_005801_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_005801_10
TS23: mandible Strong Regionally restricted euxassay_005801_10
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_005801_10
TS23: tongue mesenchyme Weak Uniform euxassay_005801_10
TS23: hypothalamus mantle layer Moderate Single cells euxassay_005801_10
Specimen euxassay_005801_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_005801_11
TS23: mandible Strong Regionally restricted euxassay_005801_11
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_005801_11
TS23: tongue mesenchyme Weak Uniform euxassay_005801_11
TS23: hypothalamus mantle layer Moderate Single cells euxassay_005801_11
TS23: laryngeal cartilage Moderate Uniform euxassay_005801_11
Specimen euxassay_005801_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_005801_12
TS23: mandible Strong Regionally restricted euxassay_005801_12
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_005801_12
TS23: tongue mesenchyme Weak Uniform euxassay_005801_12
TS23: hypothalamus mantle layer Moderate Single cells euxassay_005801_12
TS23: laryngeal cartilage Moderate Uniform euxassay_005801_12
Specimen euxassay_005801_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tongue mesenchyme Weak Uniform euxassay_005801_13
TS23: hypothalamus mantle layer Moderate Single cells euxassay_005801_13
TS23: laryngeal cartilage Moderate Uniform euxassay_005801_13
Specimen euxassay_005801_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tongue mesenchyme Weak Uniform euxassay_005801_14
TS23: hypothalamus mantle layer Moderate Single cells euxassay_005801_14
Specimen euxassay_005801_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_15
TS23: mandible Strong Regionally restricted euxassay_005801_15
TS23: cerebral cortex mantle layer Weak Regionally restricted euxassay_005801_15
TS23: clavicle Strong Regionally restricted euxassay_005801_15
TS23: tongue mesenchyme Moderate Uniform euxassay_005801_15
TS23: hypothalamus mantle layer Moderate Single cells euxassay_005801_15
Specimen euxassay_005801_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_16
TS23: mandible Strong Regionally restricted euxassay_005801_16
TS23: maxilla Strong Regionally restricted euxassay_005801_16
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_005801_16
TS23: clavicle Strong Regionally restricted euxassay_005801_16
TS23: tongue mesenchyme Moderate Uniform euxassay_005801_16
TS23: hypothalamus mantle layer Moderate Single cells euxassay_005801_16
Specimen euxassay_005801_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_17
TS23: mandible Strong Regionally restricted euxassay_005801_17
TS23: maxilla Strong Regionally restricted euxassay_005801_17
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_005801_17
TS23: clavicle Strong Regionally restricted euxassay_005801_17
TS23: tongue mesenchyme Moderate Uniform euxassay_005801_17
TS23: hypothalamus mantle layer Moderate Single cells euxassay_005801_17
Specimen euxassay_005801_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_18
TS23: mandible Strong Regionally restricted euxassay_005801_18
TS23: maxilla Strong Regionally restricted euxassay_005801_18
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_005801_18
TS23: clavicle Strong Regionally restricted euxassay_005801_18
TS23: hypothalamus mantle layer Moderate Single cells euxassay_005801_18
Specimen euxassay_005801_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_19
TS23: mandible Strong Regionally restricted euxassay_005801_19
TS23: maxilla Strong Regionally restricted euxassay_005801_19
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_005801_19
Specimen euxassay_005801_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_20
TS23: mandible Strong Regionally restricted euxassay_005801_20
TS23: maxilla Strong Regionally restricted euxassay_005801_20
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_20
Specimen euxassay_005801_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: rib Strong Regionally restricted euxassay_005801_21
TS23: mandible Strong Regionally restricted euxassay_005801_21
TS23: maxilla Strong Regionally restricted euxassay_005801_21
TS23: humerus Strong Regionally restricted euxassay_005801_21
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_21
Specimen euxassay_005801_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_005801_22
TS23: mandible Strong Regionally restricted euxassay_005801_22
TS23: maxilla Strong Regionally restricted euxassay_005801_22
TS23: humerus Strong Regionally restricted euxassay_005801_22
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_22
Specimen euxassay_005801_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: orbito-sphenoid Strong Regionally restricted euxassay_005801_23
TS23: humerus Strong Regionally restricted euxassay_005801_23
TS23: cerebral cortex mantle layer Strong Regionally restricted euxassay_005801_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory