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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827793
Gene symbol: Rpa1
Gene name: replication protein A1
Probe: IMAGE clone 3156100
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008207_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_01
Specimen euxassay_008207_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_02
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_008207_02
Specimen euxassay_008207_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_03
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_03
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_008207_03
Specimen euxassay_008207_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_04
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_04
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_008207_04
Specimen euxassay_008207_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_05
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_05
Specimen euxassay_008207_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_06
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_06
Specimen euxassay_008207_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_07
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_008207_07
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_07
Specimen euxassay_008207_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_008207_08
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_08
Specimen euxassay_008207_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_008207_09
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_09
Specimen euxassay_008207_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_008207_10
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_008207_10
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_008207_10
Specimen euxassay_008207_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_008207_11
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_008207_11
Specimen euxassay_008207_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_008207_12
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_008207_12
TS23: pons ventricular layer Strong Regionally restricted euxassay_008207_12
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_12
TS23: spinal cord ventricular layer Moderate Regionally restricted euxassay_008207_12
Specimen euxassay_008207_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_008207_13
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_008207_13
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_13
TS23: pons ventricular layer Strong Regionally restricted euxassay_008207_13
Specimen euxassay_008207_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_008207_14
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_008207_14
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_008207_14
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_008207_14
TS23: pons ventricular layer Weak Regionally restricted euxassay_008207_14
Specimen euxassay_008207_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_008207_15
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_008207_15
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_008207_15
TS23: pons ventricular layer Weak Regionally restricted euxassay_008207_15
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_008207_15
Specimen euxassay_008207_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_008207_16
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_16
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_008207_16
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_008207_16
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_008207_16
Specimen euxassay_008207_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_17
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_008207_17
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_17
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_008207_17
Specimen euxassay_008207_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_18
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_18
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_008207_18
Specimen euxassay_008207_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_19
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_19
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_008207_19
Specimen euxassay_008207_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_20
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_20
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_008207_20
Specimen euxassay_008207_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_21
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_008207_21
TS23: medulla oblongata basal plate ventricular layer Strong Regionally restricted euxassay_008207_21
Specimen euxassay_008207_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_22
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_008207_22
Specimen euxassay_008207_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_23
TS23: rest of cerebellum ventricular layer Strong Regionally restricted euxassay_008207_23
Specimen euxassay_008207_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_008207_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory