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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827530
Gene symbol: Ptprn
Gene name: protein tyrosine phosphatase receptor type N
Probe: T36924
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009628_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_03
TS23: facial ganglion Moderate Regionally restricted euxassay_009628_03
Specimen euxassay_009628_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_04
TS23: facial ganglion Moderate Regionally restricted euxassay_009628_04
Specimen euxassay_009628_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_05
TS23: facial ganglion Moderate Regionally restricted euxassay_009628_05
Specimen euxassay_009628_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_009628_06
TS23: dorsal root ganglion Moderate Single cells euxassay_009628_06
Specimen euxassay_009628_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_07
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_009628_07
TS23: dorsal root ganglion Moderate Single cells euxassay_009628_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_07
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009628_07
Specimen euxassay_009628_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_08
TS23: dorsal root ganglion Moderate Single cells euxassay_009628_08
TS23: cervical ganglion Moderate Regionally restricted euxassay_009628_08
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009628_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009628_08
Specimen euxassay_009628_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_009628_09
TS23: ventral grey horn Moderate Regionally restricted euxassay_009628_09
TS23: cervico-thoracic ganglion Weak Regionally restricted euxassay_009628_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009628_09
Specimen euxassay_009628_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_009628_10
TS23: ventral grey horn Moderate Regionally restricted euxassay_009628_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009628_10
Specimen euxassay_009628_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_009628_11
TS23: ventral grey horn Weak Regionally restricted euxassay_009628_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009628_11
Specimen euxassay_009628_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Weak Regionally restricted euxassay_009628_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009628_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_12
Specimen euxassay_009628_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_009628_13
TS23: thoracic ganglion Weak Regionally restricted euxassay_009628_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009628_13
Specimen euxassay_009628_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: ventral grey horn Moderate Regionally restricted euxassay_009628_14
TS23: thoracic ganglion Moderate Regionally restricted euxassay_009628_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009628_14
Specimen euxassay_009628_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: dorsal root ganglion Moderate Single cells euxassay_009628_15
TS23: ventral grey horn Moderate Regionally restricted euxassay_009628_15
TS23: cervico-thoracic ganglion Moderate Regionally restricted euxassay_009628_15
TS23: cervical ganglion Moderate Regionally restricted euxassay_009628_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009628_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_15
Specimen euxassay_009628_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal nerve Moderate Regionally restricted euxassay_009628_16
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_16
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_009628_16
TS23: dorsal root ganglion Moderate Single cells euxassay_009628_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_16
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_009628_16
Specimen euxassay_009628_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_009628_17
TS23: dorsal root ganglion Moderate Single cells euxassay_009628_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_17
Specimen euxassay_009628_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_009628_18
Specimen euxassay_009628_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009628_19
TS23: facial ganglion Weak Regionally restricted euxassay_009628_19
Specimen euxassay_009628_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Weak Regionally restricted euxassay_009628_20
TS23: facial ganglion Weak Regionally restricted euxassay_009628_20
Specimen euxassay_009628_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_21
TS23: facial ganglion Moderate Regionally restricted euxassay_009628_21
Specimen euxassay_009628_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_009628_22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory